Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0238 ATGCTAAAAGAAAACACGTGGAATGGGAGCTGCTCGCAAATTGAGGTCCCACCGGAGAAGGCAGAGTTGATCAAGAATGGGAAGAAGATTGCAGCCTTTGTGCCCAATGATGGTTGCTTGAACTACATTGAAGAGAATGACGAGGTGCTGATCGCTGGATTTGGTCGAAAAGGGTATGCTGTTGGAGATATATATTCCCGGAGTTCGATTCAAGGTTGTAAAGGTATCAGGGGTGTCCCTTTTGGCTCTCTTCAAAGAGAAGAAGGAGAAGCCCAGAATTCAGAAAGATCTGGTGTTTTCATCAAAAGCATTTGTGATGTAAAAGATTTTGACCTTCCTGACGCTAAGTAA 351 0.4387 MLKENTWNGSCSQIEVPPEKAELIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGYAVGDIYSRSSIQGCKGIRGVPFGSLQREEGEAQNSERSGVFIKSICDVKDFDLPDAK 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0238 116 FunFam 40S ribosomal protein S23 18 93 - -
Acco08g0238 116 SUPERFAMILY Nucleic acid-binding proteins 21 57 IPR012340 -
Acco08g0238 116 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 23 64 IPR006032 GO:0003735|GO:0005840|GO:0006412
Acco08g0238 116 Pfam Ribosomal protein S12/S23 21 64 IPR006032 GO:0003735|GO:0005840|GO:0006412
Acco08g0238 116 Gene3D - 19 79 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0238 Acco-ChrAcco08 1770632 1773437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0238 20 64 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 91.111 1.76e-24 89.0