Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0232 ATGGATTACATCGACAACTCGCCGCCGATGGATCTGATGCGCTCCGAGAAAATGACCCTCGTTCAACTAATCATGCCCGTCGAGTCCGCTCATCGAGCTCTCTCTTATTTGGGCGAACTTGGCCTCCTCCAATTTCGAGATTTGAATGATGATAAAAGCCCCTTCCAAAGAACCTTTGCTAATCAGGTAAAGCGGTGTGCAGAGATGTCGAGAAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGTCTGATGTGTTCTCCTTCCCTTGCCTTTCAACCTGATATTGAGTTAGAGGAACTAGAGGTACAGCTTGCTGAACATGAACATGAGCTAAATGAAATGAACTCTAATAGTGAGAAACTTCAGCAGACATATAATGAGCTCCTGGAGTTCAAGATTGTATTGCAAAAGGCATTTGGTTTTCTTGCATCAAGTCATAGCCATGCTGCAATAGAGGAGAGAGAACTGGATGAGCATGCATACTCTAACAATGATGATTATGTTGAGGGTGCATCTTTGCTTGAACAGGAAACAAGGCCTGGATCGTCAAATCAATCCGGTTTAAGATTTATCAGTGGAATAGTTTGTAAATCTAAAGTTCTTAGGTTTGAAAGGATGCTGTTTCGCGCTACAAGAGGCAATATGTTTTTCAACCAGGCACCAGCTGATGAACAAATCATGGATCCTATTTCAACAGAGATGGTTGAGAAAACAGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGACTAAAGATGCTGAAAATTTGTGAGGCATTTGGTGCACATTGTTACCCTGTGCCTGAAGATATACATAAACACAGGCAAATAACTAGGGAGGTTTCATCGCGTCTTGTTGACTTAGAAGCAACTTTGGATGCTGGTATTAGGCACAGGAATAAGGCCCTTGCTTCCATAGGGGATCATTTAGCAAAATGGATAAATATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTCAACATGCTTAATTTTGATGTCACAAAAAAATGTCTTGTCGGAGAGGGATGGTGCCCCATATTTGCGAAAACACAGATCCAGGAGGCACTGCATCGAGCAACTTTTGATAGTAGTTCTCAAGTTGGCATAATCTTTCATCCCATGGATGCAGTGGAATCACCACCTACTTATTTTAGAACCAACCGCTTCACTAGTGCTTTCCAGGAAATTGTTGATGCATACGGTGTTGCAAGATACCAAGAAGCAAATCCTTCAGTTTACACAGTAATTACATTCCCATTTCTTTTTGCTGTGATGTTTGGGGACTGGGGTCATGGAATCTGCCTGTTGCTAGGAGCACTATTTCTTATAGCACGTGAAAGCAAGTTCAGCACACAGAAACTCGGAAGCTTTATGGAGATGCTATTTGGAGGGCGCTATGTGCTTCTTTTGATGGCACTTTTTTCAATCTATTGTGGGCTAGTCTACAACGAATTCTTCTCTGTTCCTTTTCACATTTTTGGCAGATCGGCTTATGATTGCCGAGATACTTCGTGCAGGGATGCACATACTGCTGGCTTACTCAAACGCCATGATACATACCCGTTTGGTGTGGATCCCAGCTGGCGAGGAAGTCGATCAGAATTGGCTTTTCTGAACTCACTCAAGATGAAGATGTCCATTCTTTTAGGAGTGGTGCAGATGAACTTAGGAATTATGTTAAGTTATTTCAATGCTCGTTTCTTTGGTAACTCTGTGGATATAAGGTACCAGTTTGTGCCACAGGTGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTATTGTTAAGTGGTGTACTGGGTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTTTAAGTCCCACTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGTTTATTCAGATTGTGTTATTGCTATTGGCTTTAGTTGCAGTTCCATGGATGCTATTTCCAAAACCTTTTATATTAAAGAAGCTTCATACAGCGAGATATCAAGGACATGCCTATGATAGGCTCGATTCATCTGAGATGGATATTGAGGTGGAACCAGATTCTGCTAGGTCTAGGCAACACCACGAGGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATTGAGTTTGTCCTTGGTGCAGTTTCAAATACAGCGTCATACCTTAGACTCTGGGCATTAAGCTTGGCTCACTCTGAACTTTCTACTGTTTTCTATGAAAAAGTCCTCCTTCTTGCTTGGGGGTATGACAATCTGATCATTCGGTTAGTGGGCCTAGCTATGTTTTCCTTTGCAACTGCCTTTATACTACTCATGATGGAGACGCTGAGTGCTTTCCTACATGCCCTGCGTCTTCACTGGGTGGAATTTCAAAATAAATTCTACCTTGGAGATGGCTACAAGTTCAGACCTTTTTCCTTTGCCTCATTAGCAGAGGATGATGATTGA 2466 0.4197 MDYIDNSPPMDLMRSEKMTLVQLIMPVESAHRALSYLGELGLLQFRDLNDDKSPFQRTFANQVKRCAEMSRKLRFFKDQINKAGLMCSPSLAFQPDIELEELEVQLAEHEHELNEMNSNSEKLQQTYNELLEFKIVLQKAFGFLASSHSHAAIEERELDEHAYSNNDDYVEGASLLEQETRPGSSNQSGLRFISGIVCKSKVLRFERMLFRATRGNMFFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARLKMLKICEAFGAHCYPVPEDIHKHRQITREVSSRLVDLEATLDAGIRHRNKALASIGDHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALHRATFDSSSQVGIIFHPMDAVESPPTYFRTNRFTSAFQEIVDAYGVARYQEANPSVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKFSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLVYNEFFSVPFHIFGRSAYDCRDTSCRDAHTAGLLKRHDTYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVVQMNLGIMLSYFNARFFGNSVDIRYQFVPQVIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRFIQIVLLLLALVAVPWMLFPKPFILKKLHTARYQGHAYDRLDSSEMDIEVEPDSARSRQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLAMFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYLGDGYKFRPFSFASLAEDDD 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0232 821 Pfam V-type ATPase 116kDa subunit family 36 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
Acco08g0232 821 PANTHER VACUOLAR PROTON ATPASES 12 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Acco08g0232 821 Coils Coil 99 133 - -
Acco08g0232 821 PIRSF ATP6V0A1 8 821 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0232 Acco-ChrAcco08 1705752 1714344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0232 2 814 Primary Pumps ATPases(2) AT2G28520 79.975 0.0 1339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3822 01 53993948 54002198 Acco08g0232 08 1705752 1714344 CCT