Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0228 ATGTTAGATCTTAATCTTAATGCGGATTCGACCGATTTGACTCAGAACCATGACACGGTCATGTTCTTTGACGAATTTCCTGAAGCTTCGGCGAATCAAATGGCGGAATCGGGGACCTCTAATTCATCCGTCGTCAATGCCGACGGGTCCAGTACTGGAGGAGGTGATGATGAATCTTGCTCTACACGCGCTGGCGACGTAGTCACCTTCAATTTCGATATCCTTAAGGTGGACGGCGGTAACGACGTCGCAACCAGGGAGTTGTTTCCGGTGAGTGGAGCGAAAGGAGCGGATAGCGACCCTGGTAATTGGCAAGGGCAGTCTTCATTTCCCTTTCCATCAAATAAGAGCTGGATGGATCTCTCATTCAATAGTCAAGGTGTCAGCACAGAGGCAAAGATGATTCAACTTCAGCAACAACCTCAGCCGCAGGTGAAGAAGAGCAGGAGAGGTCCAAGGTCTCGGAGCTCCCAGTACAGAGGAGTCACCTTCTATAGGAGGACTGGAAGATGGGAATCACATATCTGGGACTGTGGGAAACAAGTCTATTTAGGCGGTTTTGACACTGCACATGCCGCTGCTAGAGCATACGATCGAGCTGCTATTAAATTCAGGGGAGTTGAAGCTGATATCAATTTCAATCTCAGTGATTATGAGGAGGATCTTAAACAGGTGAAGAACCTTACCAAGGAGGAGTTTGTTCATATTCTTCGTCGCCAGAGTACTGGTTTCTCCAGGGGAAGTTCAAAGTACCGAGGGGTGACACTGCACAAATGTGGACGCTGGGAAGCTCGGATGGGACAATTTCTTGGCAAAAAGTATATATACCTTGGGCTGTTCGACAGTGAAGTAGAAGCTGCAAGGGCTTACGATAAAGCAGCTATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCAAGTACTTATGAAGGGGAGTTGAACACTGAAGCGATCAATGAAGGTGTCAGTCACAGTCTTGACCTCAATTTAGGCATAGCATCCCCAGGCAAAGGTCCCAATGAAGGCAGGGGCAATCCTGAGCTCCAGTCTTTTCCTTACAACATGCATGCCAGAACATGTTCAAGGATAGAGACCAACACTGACTCAGTAATTGGCGATCAAGCTATGAAAAAACTTGTTGTAAATGGAGATCGCCCTTCTTTATGGAACGGCGTATATCCAAATTTCTTTCCCAGTGAGGAAAGAGCAGAGGGAATGAGCGCAGGTCCTGGGCAAGGAGTCCCTAACTGGACGTGGCGAAGTCATGGCCAGCTAAATGCTAACCAAGTTCCACGGTTCCCTACTGCAGCATCATCAGGATTCTCCATTTCATCATCCAATGCCATCTTCCCTGCAAAACCTATCAACTCACTTCCCCTCACTCTCTCCTTTTCTTCTTCATCCACTTCAGCTGCTCCCACCGCTTCTCCATATTATTACCACATGCAGCACTCGCATTCACCATCTTAG 1476 0.477 MLDLNLNADSTDLTQNHDTVMFFDEFPEASANQMAESGTSNSSVVNADGSSTGGGDDESCSTRAGDVVTFNFDILKVDGGNDVATRELFPVSGAKGADSDPGNWQGQSSFPFPSNKSWMDLSFNSQGVSTEAKMIQLQQQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNLSDYEEDLKQVKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGELNTEAINEGVSHSLDLNLGIASPGKGPNEGRGNPELQSFPYNMHARTCSRIETNTDSVIGDQAMKKLVVNGDRPSLWNGVYPNFFPSEERAEGMSAGPGQGVPNWTWRSHGQLNANQVPRFPTAASSGFSISSSNAIFPAKPINSLPLTLSFSSSSTSAAPTASPYYYHMQHSHSPS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0228 491 Pfam AP2 domain 249 299 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 MobiDBLite consensus disorder prediction 101 115 - -
Acco08g0228 491 SUPERFAMILY DNA-binding domain 249 308 IPR016177 GO:0003677
Acco08g0228 491 MobiDBLite consensus disorder prediction 32 60 - -
Acco08g0228 491 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 MobiDBLite consensus disorder prediction 94 115 - -
Acco08g0228 491 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Acco08g0228 491 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 117 341 - -
Acco08g0228 491 MobiDBLite consensus disorder prediction 136 159 - -
Acco08g0228 491 Gene3D AP2/ERF domain 249 308 IPR036955 GO:0003700|GO:0006355
Acco08g0228 491 Gene3D AP2/ERF domain 157 215 IPR036955 GO:0003700|GO:0006355
Acco08g0228 491 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Acco08g0228 491 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 MobiDBLite consensus disorder prediction 32 58 - -
Acco08g0228 491 FunFam AP2-like ethylene-responsive transcription factor 249 309 - -
Acco08g0228 491 CDD AP2 158 216 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 CDD AP2 249 309 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Acco08g0228 491 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0228 Acco-ChrAcco08 1669991 1673464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0228 73 339 AP2-EREBP Transcription Factor Family AT4G36920 63.768 5.09e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco08g0228 AP2 2.9e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3827 01 54037136 54041073 Acco08g0228 08 1669991 1673464 CCT