Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0223 ATGGGTTGCTTTCTATGCCCTCGCGAACCAACCAACAAACCTTCTTCCCTTCATCACAATTCCAAAAGTCTCATTCGTTGCGAGAGGACGACGAATCATCACCATCGCGCTATTGCAGATAAGGTTAAAGCAGACTCGAACGTGAATGTGAAGAAGGAAATTATTTCTCCCAAGTCTAATGGACTTTCTTCGGAGCTCAAGGCCTTAAATTTAGAAGGAAAAATTCCAATTGACGGAAAAGTTAATGATCTGAATCGTGCAAAATCCTTCTCCTTCGGAGAGCTCGCAGAGGCAACAGGTCATTTCAGGCCAGATTGCTTGGTGGGCGAAGGAGGCTTTGGGAAAGTTTACAAGGGATACTTGAAGAGAACCAAACAGGTGGTGGCTATAAAGCAACTGGACCCGGATGGACATCAAGGGAAGAGGGAATTTGTGGTGGAAGTGTTGACACTGAGTATGGCAGATCACCCTAATCTGGTCAAACTCTTAGGATTCTGTGCCTCGGGACAACATAGAATGCTGGTTTATGAGTACATGCCTTTGGGATCCCTCGAGAATCATCTCTATGATCTTCCAGCAGGCAGAAAAGCACTAGATTGGAACACAAGAATGAAAATAGCAGCAGGAACAGCAAGGGGTTTGGAATATTTGCACGATAAAATAAGGCCACCAGTGATATACAGGGACCTGAAATGTTCCAACATACTGTTAGGAGAGGGATATCATCCCAAGTTGTCTGATTTTGGGTTGGCAAAAGTAGGGCCAAGTGGAGAAGACACACATGTTTCAACTAGGGTTATGGGCACATATGGCTATTGTGCTCCTGAATATGCCATGACTGGTCAATTAACTTTTAAGTCCGACATTTACAGCTTCGGTGTTGTTCTTTTGGAGCTCATCACCGGTAAACAAGCTTTTGACAACTCAAGGCCTGGCAAACAACAAAACCTCGTCTCTTGGGCAAGACCAAAGTTCAAGGACAGGAAAAGATTCTCAGAAATGGCGGATCCATCGCTTGAAGGACAATATCCAGTGAGAGGATTGTACCAAGCTCTGGCCATTGCAGCCATGTGTGCGCAAGAGAAGCCTCATATGAGACCTGCTATTGCTGACGTCGTCACTGCCCTCAACTTCCTCGCTTCCCAGAAATACGATCCACGTCATCCAATTTCACCCTCCAAGCCCAAATCCATGACAGATCATCACCATCAAACTCTTCTTGATGTTAATCTCTCTGATTCAGACGGATCTGTGACCCACCTTAACAATTATGAGACAGATCGATCTGATGAGAATCTGGGAAATAATTCTGATGAGTCGTCAGACAGATCTGGGAACGATGAAGGAAAATAA 1353 0.4486 MGCFLCPREPTNKPSSLHHNSKSLIRCERTTNHHHRAIADKVKADSNVNVKKEIISPKSNGLSSELKALNLEGKIPIDGKVNDLNRAKSFSFGELAEATGHFRPDCLVGEGGFGKVYKGYLKRTKQVVAIKQLDPDGHQGKREFVVEVLTLSMADHPNLVKLLGFCASGQHRMLVYEYMPLGSLENHLYDLPAGRKALDWNTRMKIAAGTARGLEYLHDKIRPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGEDTHVSTRVMGTYGYCAPEYAMTGQLTFKSDIYSFGVVLLELITGKQAFDNSRPGKQQNLVSWARPKFKDRKRFSEMADPSLEGQYPVRGLYQALAIAAMCAQEKPHMRPAIADVVTALNFLASQKYDPRHPISPSKPKSMTDHHHQTLLDVNLSDSDGSVTHLNNYETDRSDENLGNNSDESSDRSGNDEGK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0223 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Acco08g0223 450 MobiDBLite consensus disorder prediction 410 450 - -
Acco08g0223 450 Gene3D Phosphorylase Kinase; domain 1 77 178 - -
Acco08g0223 450 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Acco08g0223 450 Pfam Protein kinase domain 107 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0223 450 PANTHER OS07G0668900 PROTEIN 41 388 - -
Acco08g0223 450 Gene3D Transferase(Phosphotransferase) domain 1 179 391 - -
Acco08g0223 450 FunFam probable serine/threonine-protein kinase RLCKVII 77 178 - -
Acco08g0223 450 SUPERFAMILY Protein kinase-like (PK-like) 88 401 IPR011009 -
Acco08g0223 450 SMART serkin_6 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0223 450 ProSiteProfiles Protein kinase domain profile. 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0223 450 FunFam Serine/threonine-protein kinase PBS1 179 394 - -
Acco08g0223 450 MobiDBLite consensus disorder prediction 424 450 - -
Acco08g0223 450 CDD STKc_IRAK 108 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0223 Acco-ChrAcco08 1581049 1583978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0223 78 381 Glycoside Hydrolase AT3G07070 62.171 6.45e-139 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco08g0223 Pkinase 2.2e-47 CL0016