Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0216 ATGTACCCACACTCCAACGCTACATTCTCACGCGCCGCCAACTCCATCGATCGTTCGCCGTCGCAAACATCAGCCACCGCTCCAGTACCGTACCCTTCAGTTACGTCAATGCATTCTATCTCCACTTCTCAGCCACACTTTATTATTCCCGACCAGCTCGCCGTCACTGATTTTGACTCGCTGCTCAACTCGGAGATGAGCCTCAACAATAGTTACAGCAGCGGTTGTAGCAGCTACGGCTCGCCCGGGTCGCTGGCGACCTCTAAAACTCAAAGACCAAGCTCGATGCAGCGGAGCGAGAGCAGCCACTCGCTCCATAAGAACGAACATCGCCATCCTATTTCTGCTCTGTTTACCAAGTTTTTCGACTCCGACGACAGTCCGGTACGGCGAGTTTACAGCACCGGTGATTTGCAGAGGAATAATCAAGGGTCAGAGATTGCATTGTCAAGCGAAAGTAGTATGATCATAGAAGGAATGAGCAGAGCATGTCGCTATAGTCCAGAGGAGAAGAAGGTGAGGATTGAGAGATACAGAAGCAAGCGAAATCTGAGAAACTTCAACAAGAAAATCAAGTATGCTTGCAGGAAGACATTAGCAGACAGCAGGCCACGCATCAGAGGAAGATTTGCGAGGAACGCAGAAACTGAGAAGAACCCTGAAGTTCAATGGAGCCATGAGAATGGTGTTGGAGCTGAGGAAGAATATGAAGAAGAAGAGAATTGGTTTCATTTGTTCGATAATTTAGTTACTGCAAATAATCATGTTCAAGACCCTCAAGATAATAATTCTTCATTTGGTCTCATGTTTTAG 813 0.4723 MYPHSNATFSRAANSIDRSPSQTSATAPVPYPSVTSMHSISTSQPHFIIPDQLAVTDFDSLLNSEMSLNNSYSSGCSSYGSPGSLATSKTQRPSSMQRSESSHSLHKNEHRHPISALFTKFFDSDDSPVRRVYSTGDLQRNNQGSEIALSSESSMIIEGMSRACRYSPEEKKVRIERYRSKRNLRNFNKKIKYACRKTLADSRPRIRGRFARNAETEKNPEVQWSHENGVGAEEEYEEEENWFHLFDNLVTANNHVQDPQDNNSSFGLMF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0216 270 ProSiteProfiles CCT domain profile. 171 213 IPR010402 GO:0005515
Acco08g0216 270 Pfam CCT motif 173 213 IPR010402 GO:0005515
Acco08g0216 270 MobiDBLite consensus disorder prediction 79 110 - -
Acco08g0216 270 MobiDBLite consensus disorder prediction 1 30 - -
Acco08g0216 270 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 68 229 IPR045281 GO:0009909
Acco08g0216 270 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0216 Acco-ChrAcco08 1515439 1517667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0216 170 236 C2C2-CO-like Transcription Factor Family AT5G57660 47.761 1.59e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco08g0216 CCT 3.2e-17 CL0281