Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0214 ATGAACATCTCACTGGTTTTTCATAAATTCCTAGATGCCAAGATGATGGATCGTAGAAAGATTGTCTTCTTTATCTTTGGCTTTTCAATTTTGCCGCTGCTATGCTTTTCTGCCAGCTTCGTTCCACAAGATAATTATCTTATAGACTGTGGAGCATCTTCAAATACTTCATTCGGTGGCCGCAATTTCACGGCAGATGCGTTCTACAAGGATCTCCTTTCTACCAAACGTGATGTTCTCGCCATTACCTCTTCAAAATCAATCGCTTCCTCTGCCGATTCACCTCTCTATCAAACAGCAAGAATTTTCAGTGAACAGTCAAAGTACAAATTCTCCATCAACCAAAAGGGTCGACATTGGATCCGTCTCTATTTCTGTCCATTTCAGTATCAGAACATAGATATGAGTACTGCAAATTTTTCTGTCACTACCCAAAACAATGTCCTTCTCAGCGACTTCTCTGTGCAGAAAAATTCAGTTATGAAGGAATACTCTGTGAATGTGACCTCAGACAACCTTGTGATCACCTTTACGCCTTCCAAAAATTCCATTGCGTTCGTAAATGCCATTGAAGTTGTTTCAGTACCCGATGAACTCATTGTTGATGATTCCTCCTCCTTAAATCCACCAGAAAGTTTCACTGGGTTGGTGACACGGGCATTTGAGACAGTTTGGAGGATTAACATGGGTGGTCCTACTATCTCCCCAGCAAATGATACCCTTCAACGGACCTGGGTACCAGACCAAAATTTTATTGTCACTCCTAACCTTGCTACCAATGTTACAAATATGGCTGCCGTTAAATATGTAGTCGGTTTGTCAACAGAGAATATTGCTCCGCGTTCAGTCTATGGTACTGCCACAGAAATGAACTCAAGCGGTGATCCTCGTAGTAATTTCAATGTGACCTGGCAGTTTGATGTCGATCCAGGATTTCAGTATCTTGTTCGACTTCACTTTTGTGACATAGTTAGCAAAAGTCTCAACGAACTCTACTTCAATGTCTATGTCAACTCCTACACGGCGGCCAGAGATATGGACCTCAGCGTTTTGAGTAACAATGTTTTGGGTGCTCCAACTTACAAGGATTTTGTTATGGACCCAACTGATGGCAAGAAAATTCGTGTAAGTGTCGGCCCTTCTCCTTTAAACAGTGATTACCCGAACGCCATTTTGAATGGGCTGGAGATCATGAAAATGAGTAATTCTAAGGGCAGTCTGAGCGTAGCAACAGCTGTGATTGGTACTGGTTCAAGCTCAAAGAATAAAGTAGCCATCATAGTGGGTGTGGTAGTGGGGACCTTGTGTGCAATGGTCTTGGCTGGATTTTTCTTTGTATTCTGCAGAAGAAAACGTTTGAGACGACAAGGCCTTTCAAAGACATGGGTTCCCTTATCCATTAATGGTGGAATCTCTCATACCATGGGAAGCAAATACTCTAATGGCACAACACTAAGTGCTGCTTCCAACTTAGGGTATCGCATCCCATTTGTGGCAGTTCAGGAGGCTACAAACAATTTTGATGAGAGCTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTGTACAAGGGAGAACTAAATGATGGCACTAAGGTGGCAGTTAAGAGAGGGAATCCTCGGTCCCAGCAAGGGCTTGCAGAGTTTCGAACTGAAATTGAAATGCTATCTCAGTTCCGTCATCGCCATTTGGTGTCATTGATTGGGTATTGTGATGAGAAAAATGAGATGATCTTGATATATGAATATATGGAAAATGGAACTCTCAAGAGTCATCTCTATGGTTCAGGCCTCCCAAGTTTGAGTTGGAAAGAAAGAATGGAGATCTGTATTGGTGCAGCTAGAGGACTGCATTACCTTCATACTGGCTATGCCAAGGCAGTTATACATCGAGATGTGAAGTCTGCAAATATCCTGCTTGATGAGAACCTTATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACAGGGCCTGAAATTGATCAGACACATGTGAGCACGGCAGTGAAAGGAAGTTTTGGATACCTTGATCCTGAGTATTTCCGTAGGCAACAATTAACAGAAAAATCAGATGTTTATTCATTCGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTAATAGACCCGTCACTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAGGGGCAATTGGAGCAAATCATCGATCCTACGCTTGCAGGGAAGATCAGACCGGATTCTCTCAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTTCAGCTTCAAGAGGCAGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAACATGATTGGCGAACTCTCTCCACAGATAAACAATTTCAATCACGATGCAAGTGTTTCAGTTGCTCAGTTTGAAGCTTCAACCACAGATGACCTGTCTGGTGTTTCAATGAGTACGGTTTTCTCACAGCTGGTGAAGTCCGAGGGGAGGTGA 2544 0.4304 MNISLVFHKFLDAKMMDRRKIVFFIFGFSILPLLCFSASFVPQDNYLIDCGASSNTSFGGRNFTADAFYKDLLSTKRDVLAITSSKSIASSADSPLYQTARIFSEQSKYKFSINQKGRHWIRLYFCPFQYQNIDMSTANFSVTTQNNVLLSDFSVQKNSVMKEYSVNVTSDNLVITFTPSKNSIAFVNAIEVVSVPDELIVDDSSSLNPPESFTGLVTRAFETVWRINMGGPTISPANDTLQRTWVPDQNFIVTPNLATNVTNMAAVKYVVGLSTENIAPRSVYGTATEMNSSGDPRSNFNVTWQFDVDPGFQYLVRLHFCDIVSKSLNELYFNVYVNSYTAARDMDLSVLSNNVLGAPTYKDFVMDPTDGKKIRVSVGPSPLNSDYPNAILNGLEIMKMSNSKGSLSVATAVIGTGSSSKNKVAIIVGVVVGTLCAMVLAGFFFVFCRRKRLRRQGLSKTWVPLSINGGISHTMGSKYSNGTTLSAASNLGYRIPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKSHLYGSGLPSLSWKERMEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDASVSVAQFEASTTDDLSGVSMSTVFSQLVKSEGR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0214 847 Gene3D Phosphorylase Kinase; domain 1 470 582 - -
Acco08g0214 847 Pfam Protein tyrosine and serine/threonine kinase 512 705 IPR001245 GO:0004672|GO:0006468
Acco08g0214 847 FunFam Putative receptor-like protein kinase 45 196 - -
Acco08g0214 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Acco08g0214 847 Pfam Malectin-like domain 48 400 IPR024788 -
Acco08g0214 847 Gene3D Transferase(Phosphotransferase) domain 1 583 800 - -
Acco08g0214 847 FunFam receptor-like protein kinase FERONIA 472 582 - -
Acco08g0214 847 SUPERFAMILY Protein kinase-like (PK-like) 485 778 IPR011009 -
Acco08g0214 847 SMART serkin_6 507 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0214 847 PANTHER OS07G0166700 PROTEIN 494 784 IPR045272 GO:0004714|GO:0006468
Acco08g0214 847 FunFam Receptor-like protein kinase FERONIA 220 402 - -
Acco08g0214 847 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Acco08g0214 847 ProSiteProfiles Protein kinase domain profile. 507 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0214 847 FunFam Receptor-like protein kinase FERONIA 583 798 - -
Acco08g0214 847 CDD STKc_IRAK 513 778 - -
Acco08g0214 847 Gene3D - 44 195 - -
Acco08g0214 847 Gene3D - 220 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0214 Acco-ChrAcco08 1502729 1505272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0214 16 847 Receptor kinase-like Gene Family AT3G46290 66.746 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco08g0214 Malectin_like 4.9e-43 CL0202