Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0200 ATGGCTCCAGCTAAAGCCATTTTATCAGTTGATAGTTCGAAGAAAACTGATCCGAAGGCGCAGGCCTTGAAAACTGCTAAAGCAGTTAAATCAGGCCCTACCTTCAAGAAGAAAGCCAAGAAAATCAGAACCTCTGTTACATTCCATCGGCCAAAGACTTTGAAAAAGGCTAGGAATCCCAAATACCCTCGCACTAGTGCTCCACCAAGGAATAAACTTGATCATTATCAAATTTTGAAGTACCCTCTCACTACTGAGTCTGCAATGAAAAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACCTACGTGCTGACAAGAAGAAGATAAAGGATGCGGTGAAGAAAATGTATGACATTCAGGCCAAGAAAGTAAATACCTTGATCAGGCCCGATGGCACCAAGAAGGCATATGTTAGGCTGACACCTGATTATGATGCATTGGACGTAGCAAACAAAATTGGGATTATCTAA 477 0.4109 MAPAKAILSVDSSKKTDPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKARNPKYPRTSAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0200 158 Pfam Ribosomal protein L23 78 140 IPR013025 GO:0003735|GO:0005840|GO:0006412
Acco08g0200 158 Pfam Ribosomal protein L23, N-terminal domain 19 68 IPR005633 -
Acco08g0200 158 ProSitePatterns Ribosomal protein L23 signature. 136 151 IPR001014 GO:0019843
Acco08g0200 158 PANTHER 60S RIBOSOMAL PROTEIN L23A 11 158 IPR013025 GO:0003735|GO:0005840|GO:0006412
Acco08g0200 158 Gene3D - 39 158 IPR012677 -
Acco08g0200 158 FunFam 60S ribosomal protein L23a 37 158 - -
Acco08g0200 158 NCBIfam 50S ribosomal protein L23 82 158 IPR019985 GO:0003735|GO:0005840|GO:0006412
Acco08g0200 158 MobiDBLite consensus disorder prediction 1 71 - -
Acco08g0200 158 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 75 151 IPR012678 GO:0003735|GO:0005840|GO:0006412
Acco08g0200 158 Hamap 50S ribosomal protein L23 [rplW]. 78 158 IPR013025 GO:0003735|GO:0005840|GO:0006412
Acco08g0200 158 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0200 Acco-ChrAcco08 1382774 1384437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0200 1 158 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 85.443 2.72e-68 202