Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0197 ATGCAAGGGAATCTTTCATCAGCATTCTCTGTTCTCCAAACAATGGCGATTTCTAGAATTGCTGTCGGACATCCATCGGAGTTTGGCCAAGCTGGTGCTCTTAAGGCTGCTCTGGCAGAGTTCATTTCAGTGCTCATCTTTGTGTTCGCCGGAGAAGGCTCCGGCATGGCTTTCAACAAGTTGACGGACAATGGATCGTCGACGCCGGCGGGGTTAGTGCAAGCCTCGTTAGCTCATGGCTTCGCATTGTTCGTGGGAGTTGCAGTTGGCGCCAACATTTCAGGAGGCCATGTGAATCCCGCCGTTACTTTTGGCGCCTTCGTCGGGGGTCACATCTCTCTCGTTAGAACCATTTTGTACTGGATCGCCCAATTGCTTGGCTCTGTTGTTGCTTGCTTGCTCCTTAAATTCTCCACCGGCGGACTGGAAACATCTGCTTTCTCGTTATCAACCGGAGTGGGTGTATGGAACGCGGTGGTGTTTGAGATAGTGATGACCTTCGGTCTCGTGTACACGGTGTATGCGACGGCTTTAGACCCAAAGAAGGGTAACATTGGGACAATCGCTCCGATCGCGATTGGGTTCATCGTCGGAGCGAACATATTGGCGGGTGGGGCCTTTGACGGAGCATCCATGAACCCGGCTGTCTCTTTCGGGCCAGCTGTCGTGAGCTGGACGTGGACCAATCAGTGGGTTTACTGGGTGGGCCCCCTCATCGGGGCAGCTATAGCTGCTGTTGTTTATGAGTTGGCATTCATGACCCAAACTCATCAACAACTTCCCAACACAGAATATTAA 798 0.5226 MQGNLSSAFSVLQTMAISRIAVGHPSEFGQAGALKAALAEFISVLIFVFAGEGSGMAFNKLTDNGSSTPAGLVQASLAHGFALFVGVAVGANISGGHVNPAVTFGAFVGGHISLVRTILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSTGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGNIGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNQWVYWVGPLIGAAIAAVVYELAFMTQTHQQLPNTEY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0197 265 Gene3D Glycerol uptake facilitator protein. 18 265 IPR023271 -
Acco08g0197 265 FunFam Probable aquaporin TIP1-1 18 265 - -
Acco08g0197 265 CDD MIP 35 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 PANTHER AQUAPORIN-8 20 260 IPR034294 -
Acco08g0197 265 SUPERFAMILY Aquaporin-like 33 260 IPR023271 -
Acco08g0197 265 Pfam Major intrinsic protein 31 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 PRINTS Major intrinsic protein family signature 231 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 PRINTS Major intrinsic protein family signature 161 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 PRINTS Major intrinsic protein family signature 194 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0197 265 ProSitePatterns MIP family signature. 97 105 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0197 Acco-ChrAcco08 1344953 1347564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0197 15 265 Major Intrinsic Protein MIP AT2G36830 75.697 1.35e-136 383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3850 01 54226193 54227154 Acco08g0197 08 1344953 1347564 CCT