Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0187 ATGACCCTTGATGATATCATCAAGAAGAACAAGAAATCTGGATCTGGTAACTCCAGAGGTCGTGGCCGAGGATCTGGTCCTGGTCCTGCTCGCCGCTTCCCCAATCGTGCCGCCAATCGTGCAGCACCTTATACAACTGCAAAGGCACCGGAGGCGACGTGGCAGCATGATATGTTTGCGGATCAGCCTATGGCACCGCACCCAGCTCAAGGTGGTCGAGCGTCTGCCATAGAAACGGGGACTAAACTCTACATATCTAATTTGGATTACGGTGTTTCTAATGAGGATATTAAGGAGTTGTTTTCTGAAGTTGGTGATCTAAAACGTTATGCAATTCATTACGACAGGAGTGGCAGATCAAAGGGTACAGCAGAAGTAGTCTTTTCACGACGAGTTGATGCTGTAGCTGCTGTGAAGAGATACAATGATGTTCAACTTGATGGTAAACCGATGAAGATAGAGATTGTGGGGACAAACATTGCTACACCTGCTGCAGCTCCTGCTGTAAATGGAGCTGTTGGAAATTTAAACATACTTCCTAGAATTGGACAAGGTAGAGGTGGGGCTTTCGGGAGGCCACGTGGTGGTGGCAGAGGACGTGGCTTTCAGAGTGGTCGAGGACGTGGAAGAGGTCGTGGAGAGAAGGTTTCTGCAGAAGATCTTGATGCTGATCTGGAGAAGTATCATTCAGAGGCAATGGAAACAAACTGA 711 0.481 MTLDDIIKKNKKSGSGNSRGRGRGSGPGPARRFPNRAANRAAPYTTAKAPEATWQHDMFADQPMAPHPAQGGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYAIHYDRSGRSKGTAEVVFSRRVDAVAAVKRYNDVQLDGKPMKIEIVGTNIATPAAAPAVNGAVGNLNILPRIGQGRGGAFGRPRGGGRGRGFQSGRGRGRGRGEKVSAEDLDADLEKYHSEAMETN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0187 236 MobiDBLite consensus disorder prediction 184 236 - -
Acco08g0187 236 MobiDBLite consensus disorder prediction 207 236 - -
Acco08g0187 236 Pfam C-terminal duplication domain of Friend of PRMT1 184 231 IPR025715 -
Acco08g0187 236 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 1 234 - -
Acco08g0187 236 FunFam THO complex subunit 4 74 218 - -
Acco08g0187 236 Gene3D - 63 218 IPR012677 -
Acco08g0187 236 SMART rrm1_1 82 154 IPR000504 GO:0003723
Acco08g0187 236 SMART FoP_duplication_2 168 236 IPR025715 -
Acco08g0187 236 SUPERFAMILY RNA-binding domain, RBD 54 171 IPR035979 GO:0003676
Acco08g0187 236 CDD RRM_THOC4 81 155 - -
Acco08g0187 236 MobiDBLite consensus disorder prediction 1 50 - -
Acco08g0187 236 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 83 151 IPR000504 GO:0003723
Acco08g0187 236 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 81 158 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0187 Acco-ChrAcco08 1263114 1265571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0187 80 155 Eukaryotic Initiation Factors Gene Family AT2G23350 35.526 4.46e-09 54.3