Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0181 ATGGCTCTTCTCTCTATAAAATGGACCAAACCCTCCTCTCTGAGTTTCGATAGACCACAAACTCCAACCATGGCTTCTTCTTCCTCAACACTCTCCTTCCCATTTGCCGTGGCTTCCTTCCTCTTCCTTGCCACTCTCACTGACGCCACCATCCTTACCCTTGTCAACAACTGCAAGTTCACCGTCTGGCCAGCCATCCAACCCAACGCCGGTCATCCCGTCCTCGCTCGCGGAGGCTTTGTTCTCAATTCCCTCACTCACATGTCCATTCCCATACCGGATCATCACTGGTCGGGTCGGGCCTGGGCCAGAACAGGCTGCGGCTACTCCGGCAACCAGTTCCTCTGTGCCACCGGAGACTGCGGTGGCCGCCTGGAGTGCAACGGAGCTGGCGGCGCGGCTCCGGCGTCTCTGGCTCAGTTCAGCGTCCACCATGGCGCGAACGATTATTCCTCCTACGGCGTGAGCCTTGTGGACGGCTTCAACATCCCCATGACGGTGACCCCACACGAGGGTAAAGGCGTGTGTCCGGTGGTGGGTTGTCGTGTGGATCTGCTTGCAACATGTCCTCCGGCGTTGCAGCACCGTGTACCGCAGGGTCACGGTCCGGTGATGGCGTGTAAGAGTGGGTGCGAGGCTTTTAGGACGGACGAGCTGTGCTGCAGGAACCATTTCAATAGCCGACAAACGTGTAAGCCTTCGCTCTACTCAGATTTCTTCAAGCATGCGTGTCCTGCGACCTTCACTTATGCTCATGATAACCCTTCGCTAACGCACGAGTGTTCTTCCCCAAGGGAGCTCAAGGTCATATTCTGCCATTAG 822 0.5693 MALLSIKWTKPSSLSFDRPQTPTMASSSSTLSFPFAVASFLFLATLTDATILTLVNNCKFTVWPAIQPNAGHPVLARGGFVLNSLTHMSIPIPDHHWSGRAWARTGCGYSGNQFLCATGDCGGRLECNGAGGAAPASLAQFSVHHGANDYSSYGVSLVDGFNIPMTVTPHEGKGVCPVVGCRVDLLATCPPALQHRVPQGHGPVMACKSGCEAFRTDELCCRNHFNSRQTCKPSLYSDFFKHACPATFTYAHDNPSLTHECSSPRELKVIFCH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0181 273 ProSiteProfiles Thaumatin family profile. 49 273 IPR001938 -
Acco08g0181 273 PRINTS Pathogenesis-related protein signature 151 167 IPR001938 -
Acco08g0181 273 PRINTS Pathogenesis-related protein signature 263 272 IPR001938 -
Acco08g0181 273 PRINTS Pathogenesis-related protein signature 51 63 IPR001938 -
Acco08g0181 273 PRINTS Pathogenesis-related protein signature 100 111 IPR001938 -
Acco08g0181 273 Gene3D Thaumatin 50 272 IPR037176 -
Acco08g0181 273 FunFam Osmotin-like protein 51 272 - -
Acco08g0181 273 SUPERFAMILY Osmotin, thaumatin-like protein 51 272 IPR037176 -
Acco08g0181 273 CDD TLP-PA 51 272 - -
Acco08g0181 273 PANTHER OS03G0233200 PROTEIN 39 272 IPR001938 -
Acco08g0181 273 Pfam Thaumatin family 56 272 IPR001938 -
Acco08g0181 273 PIRSF PR5 9 273 IPR001938 -
Acco08g0181 273 SMART tha2 52 273 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0181 Acco-ChrAcco08 1207736 1208557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0181 30 272 Receptor kinase-like Gene Family AT5G38280 35.628 2.51e-42 151