Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0178 ATGCCACTGGTGAAAGTGAATCCTACAAGGGCACAACCTCTCATCGACGGTCGCGATTTTTCCCCCGTGCGTGCCATTGTCCCCACGCACACGCAATATGAAATTTCTCGAATCAGCTACAGACTTCGAGTAACAAACCAACTGAGTTTATTCAGAGAATTTGTAGTCCTCTGCTTTTCCGATTTCTTTTCGGCAAACATCTTAAGACGTTCTACACAATTCACCTTGAGAAAAAACTGCTTTGCTTATACTCGTTTCGTTCAAAACAAGAAAGATATGGCTGGGAAAGGCGAAGGTCCGGCGATTGGAATCGATTTGGGGACGACATATTCTTGTGTTGGCGTTTGGCAGCATGACCGTGTCGAAATCATAGCCAATGATCAGGGTAACAGGACGACGCCATCTTATGTCGCTTTCACGGATACCGAACGGTTGATTGGAGACGCCGCTAAGAACCAGGTCGCAATGAATCCAACCAACACTGTTTTCGACGCCAAGCGTTTGATTGGTAGGCGTTTCAGCGATTCTTCGGTGCAAAGTGACATGAAATTATGGCCGTTTAAGGTGATTCCTGGTGCTGGTGACAAACCTATGATTGTGGTCACTTACAAGGGAGAGGAGAAGCAATTTTCGGCCGAAGAGATTTCTTCAATGGTTCTCATGAAGATGAAGGAGATCGCCGAGGCCTATCTTGGTTCTGAGGTGAAGAACGCTGTTGTTACTGTGCCCGCATACTTCAATGATTCCCAGCGTCAAGCTACAAAGGATGCTGGTGTTATCTCTGGGCTAAATGTGATGCGTATTATTAATGAACCTACTGCTGCCGCCATCGCTTATGGACTTGACAAAAAAGCTAGCAGTACTGGTGAGAAGAATGTTCTTATTTTCGATCTTGGTGGTGGGACTTTTGATGTTTCCCTTCTCACCATTGAAGAAGGTATTTTTGAAGTGAAGGCTACTGCTGGTGATACCCACTTGGGTGGTGAGGATTTTGATAACAGAATGGTGAACCATTTTGTTCAGGAGTTTAAGAGAAAGAACAAAAAAGATATTAGTGGGAACCCCAGAGCTTTGAGGAGGTTGAGAACAGCGTGCGAGAGAGCGAAAAGGACTCTCTCATCCACCGCGCAAACAACCATCGAGATTGACTCATTATACGAAGGCATTGACTTTTACACAACCATTACTCGTGCCAGGTTCGAAGAGCTCAACATGGATCTCTTCAGAAAGTGTATGGAGCCCGTGGAGAAGTGTTTGAGGGATGCAAAGATGGATAAAAACAGCGTCCACGATGTCGTTCTTGTGGGTGGATCCACTAGAATTCCGAAGGTTCAACAGCTGTTGCAAGACTTTTTCAATGGAAAGGAGCTCTGCAAGAGCATTAACCCCGATGAGGCTGTCGCCTATGGTGCTGCCGTTCAGGCTGCAATTCTCAGTGGGGAAGGCAATCAAAAAGTGCAGGACCTTCTGTTGCTGGACGTCACACCTTTATCCCTCGGTTTGGAAACTGCCGGAGGAGTCATGACTGTGTTAATTCCCAGGAACACCACAATTCCCACCAAGAAGGAGCAAGTGTTCTCCACCTACTCTGATAATCAGCCCGGCGTGTTGATTCAGGTGTTTGAGGGTGAACGTACTAGGACCCGTGACAACAACTTGCTTGGAAAGTTTGAGTTGTCGGGCATTCCCCCTGCTCCAAGGGGAGTCCCACAAATCAATGTTTGCTTCGACATCGACGCCAATGGGATATTGAATGTATCTGCGGAGGACAAGACGACAGGGCAGAAGAATAAGATTACGATCACTAACGACAAAGGAAGGCTTTCAAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCTGAGAAGTACAAGGCGGAGGACGAGGAGCACAAGAAGAAAGTGGAGGCTAAAAATGCGCTTGAGAACTACGCATACAACATGAGGAACACCATAAAGGATGAGAAGATAGCTTCCAAACTGCCTGAAGATGATAAGAAAAAGATTGAAGACGCGATTGAGGAGACGATCAGATGGCTTGACGCGAACCAGCTTGCTGAGGTAGACGAATTAGAGGACAAGCTGAAGGAGTTGGAGGGTATTTGCAACCCCAGAATTGCCAAGATATATCAAGGCGCTGGGGGCGACGCCGGGGGAACCATGGATGAGGATGCTCCTTCTGCTGCTGGCCCCAAGATCGAGGAAGTCGACTAA 2211 0.4722 MPLVKVNPTRAQPLIDGRDFSPVRAIVPTHTQYEISRISYRLRVTNQLSLFREFVVLCFSDFFSANILRRSTQFTLRKNCFAYTRFVQNKKDMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDSSVQSDMKLWPFKVIPGAGDKPMIVVTYKGEEKQFSAEEISSMVLMKMKEIAEAYLGSEVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNQKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLPEDDKKKIEDAIEETIRWLDANQLAEVDELEDKLKELEGICNPRIAKIYQGAGGDAGGTMDEDAPSAAGPKIEEVD 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0178 736 ProSitePatterns Heat shock hsp70 proteins family signature 3. 432 446 IPR018181 -
Acco08g0178 736 SUPERFAMILY Actin-like ATPase domain 288 480 IPR043129 -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 569 585 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 100 113 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 488 507 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 429 445 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 150 158 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 128 140 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 301 311 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 238 258 - -
Acco08g0178 736 PRINTS 70kDa heat shock protein signature 461 481 - -
Acco08g0178 736 SUPERFAMILY Actin-like ATPase domain 100 283 IPR043129 -
Acco08g0178 736 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 483 637 IPR029047 -
Acco08g0178 736 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 635 716 IPR029048 -
Acco08g0178 736 Coils Coil 610 637 - -
Acco08g0178 736 Pfam Hsp70 protein 101 710 IPR013126 GO:0005524|GO:0140662
Acco08g0178 736 CDD HSPA1-2_6-8-like_NBD 101 479 - -
Acco08g0178 736 PANTHER HEAT SHOCK PROTEIN 70KDA 101 675 IPR013126 GO:0005524|GO:0140662
Acco08g0178 736 Coils Coil 680 700 - -
Acco08g0178 736 FunFam Heat shock cognate 70 kDa protein 2 411 458 - -
Acco08g0178 736 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 485 641 IPR029047 -
Acco08g0178 736 FunFam Heat shock protein 70 638 711 - -
Acco08g0178 736 FunFam Heat shock 70 kDa 483 637 - -
Acco08g0178 736 Gene3D - 102 476 - -
Acco08g0178 736 ProSitePatterns Heat shock hsp70 proteins family signature 2. 295 308 IPR018181 -
Acco08g0178 736 FunFam Heat shock 70 kDa protein 163 218 - -
Acco08g0178 736 ProSitePatterns Heat shock hsp70 proteins family signature 1. 104 111 IPR018181 -
Acco08g0178 736 Gene3D - 284 458 - -
Acco08g0178 736 FunFam Heat shock protein 70 102 289 - -
Acco08g0178 736 MobiDBLite consensus disorder prediction 712 736 - -
Acco08g0178 736 FunFam Heat shock 70 kDa protein 290 352 - -
Acco08g0178 736 Gene3D - 163 218 - -
Acco08g0178 736 Gene3D Actin; Chain A, domain 4 327 410 - -
Acco08g0178 736 FunFam Heat shock 70 kDa 327 410 - -
Acco08g0178 736 Gene3D - 638 711 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0178 Acco-ChrAcco08 1186495 1189517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0178 93 736 Calmodulin-binding Proteins AT3G12580 91.077 0.0 1207