Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0177 ATGGAGGCAAGTGAGAGTAATGGATCGAGTGGTGGGAGGAATAATAATAATGGAGTAGGGGGATCAAGATGGAACCCAACAAAGGAGCAAGTAAGTTTGTTGGAGAATCTGTATACGCAAGGGGTAAGGACGCCCAATACTGAGGAGATACAGCAAATAACAGCCAGGCTAAGGGCTTTTGGGCACATAGAAGGCAAAAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGGCAGCGTCAGAAGCAGAAGCAAGAATCCTTGGCTTATTTTAATCGCTTCCTTCATTCCCCTCCTCCTATCTTCTCTCCCCCACCGCTCTGCCCTAATGTGATATGTAGGCCATATTATGTGCCACATAGTGAAATGGGGTATGTTGCTCATCATCAACATCCCAAAGTGCTTCTGCCAGCAGGGACAGGCATTAGGATGATGCCCAGAAACTGTGAGGCGTACCCACAAATGCGTCAGGACACAGTAGTAATGCCGGATGATCATATCCATGGGCACTTGAAGAACAAAGAAACGCTTCCGCTTTTCCCTCTTCAGCCAACTGGTTTTCTGGAGGACAAAGCCAATTCATTTTCTGCTGATGATACTCCAGCTCATCATCACAATGATCAAGAAGATAATGGGCCACAAGGAAACCAGCCCTTCTTTGATTTCCTTTCTTCTTCAGGCCGAGATTTTCTGCATAGAAAATTCTGCGAGGTTATCACTGATCATGAAAAGCTCATGGAGTCATGGGACCTTTATGTGCCGGACGTTTTCTGCATCAAAAAATCTCAGACAAAAAAGGAAGAGCAAGTCAGAAGATTTGGTTCTGCAGAAGAAGATGAAGAATGTCATTTTCGAAGAGAAGCTTTTTATATAATGATAATGATGATTATTCCGGCACAGGCTAATGATATAAAGCGCAGCCAAAATTTTCATGGCTCTAAGCTTTTAGCCTTCATTGGCTCTCCACAATCTTTCTATGCTTCTGGGTTTCCGCGTTGTTCGTATCTTTAG 1011 0.4382 MEASESNGSSGGRNNNNGVGGSRWNPTKEQVSLLENLYTQGVRTPNTEEIQQITARLRAFGHIEGKNVFYWFQNHKARQRQKQKQESLAYFNRFLHSPPPIFSPPPLCPNVICRPYYVPHSEMGYVAHHQHPKVLLPAGTGIRMMPRNCEAYPQMRQDTVVMPDDHIHGHLKNKETLPLFPLQPTGFLEDKANSFSADDTPAHHHNDQEDNGPQGNQPFFDFLSSSGRDFLHRKFCEVITDHEKLMESWDLYVPDVFCIKKSQTKKEEQVRRFGSAEEDEECHFRREAFYIMIMMIIPAQANDIKRSQNFHGSKLLAFIGSPQSFYASGFPRCSYL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0177 336 MobiDBLite consensus disorder prediction 1 26 - -
Acco08g0177 336 SUPERFAMILY Homeodomain-like 17 89 IPR009057 -
Acco08g0177 336 ProSiteProfiles 'Homeobox' domain profile. 27 82 IPR001356 GO:0003677
Acco08g0177 336 MobiDBLite consensus disorder prediction 196 210 - -
Acco08g0177 336 MobiDBLite consensus disorder prediction 191 218 - -
Acco08g0177 336 SMART HOX_1 19 86 IPR001356 GO:0003677
Acco08g0177 336 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 221 IPR044555 GO:0003700|GO:0099402
Acco08g0177 336 Gene3D - 21 89 - -
Acco08g0177 336 FunFam WUSCHEL-related homeobox 4 21 88 - -
Acco08g0177 336 Pfam Homeodomain 22 81 IPR001356 GO:0003677
Acco08g0177 336 CDD homeodomain 25 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0177 Acco-ChrAcco08 1172121 1179301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0177 15 224 Wox Gene Family AT5G59340 42.339 3.38e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco08g0177 Homeodomain 1.2e-17 CL0123