Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0166 ATGGGAAAACTTGATCGTTCTCCGAAGGCGGCTCACTCCAACTGCGCCCCATTATTCTCTCACCCCTGGAAGCTCCATTCGGAGAGGATCAAATCAAGCAAGGATGCTGCGGATGGAGCCTTCCTTTCCCTTTACAGCTGGACTATTCCAGTAGGGTTAGCAGGTGAGCAACAAGGCAGAGAAAGACCAGAGCTAACACCCACTTTGGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGACCGGCCAGTGCCATCATTTTTCTTGTGTCCTATCCTTCAGGAAATAATGCATGATCCCTTGGTTGCAGCAGACGGATTCACTTACGAAGGGGAAGCCATACGTGATGGCTAG 354 0.5 MGKLDRSPKAAHSNCAPLFSHPWKLHSERIKSSKDAADGAFLSLYSWTIPVGLAGEQQGRERPELTPTLVRELEQLHVSEDRPVPSFFLCPILQEIMHDPLVAADGFTYEGEAIRDG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0166 117 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 116 IPR013083 -
Acco08g0166 117 PANTHER WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 72 116 - -
Acco08g0166 117 SUPERFAMILY RING/U-box 81 115 - -
Acco08g0166 117 ProSiteProfiles U-box domain profile. 83 117 IPR003613 GO:0004842|GO:0016567
Acco08g0166 117 Pfam U-box domain 84 115 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0166 Acco-ChrAcco08 1085159 1086407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0166 56 115 U-box Gene Family AT2G45910 45.833 1.20e-12 61.2