Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0158 ATGATTAATGCGCCGCTCGTGCCCTCGCTTTTCTTCGGATTAGCTTTATATGAATCACATCTCCGCGTCGAACACAATCTGCCGGTTACTCCTCACTCTCTCACCTTATCTTCCAGCCTTGATTATTTAGAAGTCAGACTTGTTGGTCCGGTTCTGGTTCAACTGGTATCTATGGACACTCTTCTGGAAAACTTTCCTGGTAGCCTAAATGGATTTAGATTTGAAAATGGTCATATTTCAGAATTTCCAAACCAGAACCCCACGAACGGTTTTACAGGTGATGATCAAGCCGACACTTCGTCCTTTCCAACCAATTCAGAATTTCAAGGCGAGACGGGTCATTCTTCTAGCACGAGCAAGAAAGAAGAATCGTCAGACAGTAACAAATATTCTAATCCGGCTCTCAGATTCATAAGTGATATCCTCTTGGATGAAGAAGATGACCTGGAGCGCAAGCCTTGTATGTTGCAAGATTGCTTAGCACTCCGGGCTGCTGAAAAATCTTTCTACGATGCCCTCGGTCGTAGTTACCCCTCTTCTCCTCGTCAATTCTCTAATTGCATCGATGGTGAAAACGCTGATAGCCCAGATGATCCAAACTCCTTTCCTACCCATAGTTTCGAGAGCTGCAGCAGCCATACCACTGATAATACATCTGACTCCGATTGGTTGAACAGTGTTGTTAATTCCCCAGAAGACATCCTCAATTTTTCAGATCTGCCTCCCGATCTATATGGAGGAACCGTTGATCGGAGTAACCGGCAGCTGAATCTCGGGGATTCCGTGCGAAACTCAGGATCCAGAGGAACAAGGGAAAAGAGAACCCATTGGATGGATGATTCTATAAACGAAGAAGAGGGAAGAGGTAGCAAACTTTCTGCGGTCAGTTTAAATGATTCAGAGCCAACGGAAATGTTTGATGAAGTACTTCTCTGTAATCACAGAACAGATCAATCCCCTTCAGGTGGCCCCGAACCATCTCAAAATGGCACATTCCATCTAAATATTGACTCAGGAGGATCAAATGGGAAGGCAACACGTTCAAAGAAAGGGTCTAACAAAGGGACATCAGTGGATTTATGGACTCTACTAACCCAATGTGCCCAAGCTGTTGCAAGCTTTGACCAAAGGAATGCCAATGAGCTTCTCAAGCAGATTAGGCAGCATTGTTCCCCTTTTGGCGATGGGCTTGAACGTTTAGCTTATTACTTTGCCAAGGGTCTTGAGACGCGTTTGGCTGCTGGGACTCCATCATATAACCCCAATGACAATGGAGCAACTGCTGCTGAGATGTTAAAAGCTTACAAACTATACATCACAGCTTCTCCTTTCCTCAGGATCTCAAATTTCTTGGCTAACAGAACAATTCTGAAGCTGGTAGGAGATGAAAGTAACCTTCATATTATTGATGTTGGCATTTGCTATGGTTTTCAGTGGCCTTGCCTTATCCATCGTCTTTCAGAGAGACAAGGTGGTCCTCCCAAGCTTCGTATCACAGGAATTGAGTTTCCTCAATCAGGGTTTCGCCCTGCCGAGAGGATTGAGGAGACAGGAAGAAGGTTAGCAAACTACTGCAGGAGGTTCAACGTCCCTTTCGAATACAATTGCTTCGCACAGAATTGGGAAACCATCAGGCTGGAGGATCTCAAGATCAACAGAAACGAAGTAACGGTGGTCAATTGTTTGTACAGATTGAAGAATGTGCCTGATGAAACTGTATCTGTGAACTGTCCAAGGGATGCTGTTTTGAAGCTGGTGAGGAAGATCAACCCCAACATGTTCATTCATGGTGTTGTCAATGGCACCTACAATGCACCATTTTTCGCCACTCGGTTCAGGGAGGCACTGTTCCACTACTCATCTTTGTTTGACATGTTTGAAGTCAACGTGCCCCGGGAAGATCCAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCCATGAATGTTATAGCGTGCGAGGGGGCAGAAAGGGTTGAAAGGCCTGAGACTTACAAGCAGTGGCAGGTTAGGAATCGTAGAGCTGGCTTCAAGCAACTCCGCATTGATGCACAAATCTTTAATAAAGCTCGAGAGATGGTGAAGACCGAATATCACAAGGACTTTGACGTGGATGAAGATGGCAGGTGGGTTTTGATGGGATGGAAAGGGCGTATCATTCATGCTCTTTCTATCTGGAAAGCTGCTTAA 2196 0.4536 MINAPLVPSLFFGLALYESHLRVEHNLPVTPHSLTLSSSLDYLEVRLVGPVLVQLVSMDTLLENFPGSLNGFRFENGHISEFPNQNPTNGFTGDDQADTSSFPTNSEFQGETGHSSSTSKKEESSDSNKYSNPALRFISDILLDEEDDLERKPCMLQDCLALRAAEKSFYDALGRSYPSSPRQFSNCIDGENADSPDDPNSFPTHSFESCSSHTTDNTSDSDWLNSVVNSPEDILNFSDLPPDLYGGTVDRSNRQLNLGDSVRNSGSRGTREKRTHWMDDSINEEEGRGSKLSAVSLNDSEPTEMFDEVLLCNHRTDQSPSGGPEPSQNGTFHLNIDSGGSNGKATRSKKGSNKGTSVDLWTLLTQCAQAVASFDQRNANELLKQIRQHCSPFGDGLERLAYYFAKGLETRLAAGTPSYNPNDNGATAAEMLKAYKLYITASPFLRISNFLANRTILKLVGDESNLHIIDVGICYGFQWPCLIHRLSERQGGPPKLRITGIEFPQSGFRPAERIEETGRRLANYCRRFNVPFEYNCFAQNWETIRLEDLKINRNEVTVVNCLYRLKNVPDETVSVNCPRDAVLKLVRKINPNMFIHGVVNGTYNAPFFATRFREALFHYSSLFDMFEVNVPREDPERLWFEKGIFGRDAMNVIACEGAERVERPETYKQWQVRNRRAGFKQLRIDAQIFNKAREMVKTEYHKDFDVDEDGRWVLMGWKGRIIHALSIWKAA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0158 731 MobiDBLite consensus disorder prediction 266 287 - -
Acco08g0158 731 MobiDBLite consensus disorder prediction 83 115 - -
Acco08g0158 731 MobiDBLite consensus disorder prediction 83 131 - -
Acco08g0158 731 MobiDBLite consensus disorder prediction 250 265 - -
Acco08g0158 731 MobiDBLite consensus disorder prediction 314 353 - -
Acco08g0158 731 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 283 721 IPR005202 -
Acco08g0158 731 MobiDBLite consensus disorder prediction 180 222 - -
Acco08g0158 731 MobiDBLite consensus disorder prediction 197 222 - -
Acco08g0158 731 ProSiteProfiles GRAS family profile. 351 729 IPR005202 -
Acco08g0158 731 MobiDBLite consensus disorder prediction 246 290 - -
Acco08g0158 731 Pfam GRAS domain family 362 729 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0158 Acco-ChrAcco08 1025431 1028060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0158 58 728 GRAS Transcription Factor Family AT2G29060 43.396 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco08g0158 GRAS 5.3e-113 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3882 01 54382501 54384873 Acco08g0158 08 1025431 1028060 CCT
Acco08g0158 08 1025431 1028060 Acco01g3880 01 54378040 54380343 CCT