Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0151 ATGAGTTTCGTCTTCCGAGGGAGTAGAGGAGACGTGGAAAGTGGATTTTCAGAATATGTTCCCGAAAGAACCACGATGCGTGTCCATCCAGCCCGGCCAGTAAACAGCAATACTCTTGCTTTTCTCATTACAGTTATCTTGCTGTTTATGATATTGAACTCTCCCCAGATGTCACATTTTTTGATGTGGCTTATGCTGGTTGTGTTTGTAATGGCCACAAGCCTGAGGATGTATATAACTTGGCAACAGCTTCAAGCGCAAGCAAGGGCTCATGCCACAGCAGCTGAATTACAGCTTCACGTGCCACCATCAATAGCAATTGCAACTAGAGGACGCTTGCAAGGACTCAGACTTCAGCTTGCACTTCTTGACCGTGAATTCGATGAGCTTGATAATGAAACTTTGTGGGCTCTGGAATCTGACACTGCTCCTGGTACCACTTCAATGACTGATGAAGAGATAAATGCCTTACCTGTTCACACATATAAAGTTCCTGTCCCAACAAAAAATGGCTCAGCTGGGTTGGCATCCTCTTCGCACGCAACTGAGGTAAAGCAAGATAATGGAGGGAGAGAGGGAAATGTGAAGGGTCCAGAAGAGGAGCTAACATGTAGTATATGTTTGGAACAAGTCAAGAGAGGAGAACTAGTCCGTAGCTTGCCATGTCTGCATCAGTTTCATATGAACTGCATCGATCCATGGCTGCGACAGCAGGCAAAATGCCCTGTGTGTAAATTCAGGATGGGGTCTGGATGGCAGGGAAATTCGGGGGACACTGATGGTGTAGATATTGTGTAG 798 0.4612 MSFVFRGSRGDVESGFSEYVPERTTMRVHPARPVNSNTLAFLITVILLFMILNSPQMSHFLMWLMLVVFVMATSLRMYITWQQLQAQARAHATAAELQLHVPPSIAIATRGRLQGLRLQLALLDREFDELDNETLWALESDTAPGTTSMTDEEINALPVHTYKVPVPTKNGSAGLASSSHATEVKQDNGGREGNVKGPEEELTCSICLEQVKRGELVRSLPCLHQFHMNCIDPWLRQQAKCPVCKFRMGSGWQGNSGDTDGVDIV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0151 265 SUPERFAMILY RING/U-box 199 248 - -
Acco08g0151 265 Coils Coil 113 133 - -
Acco08g0151 265 ProSiteProfiles Zinc finger RING-type profile. 204 245 IPR001841 -
Acco08g0151 265 Pfam Ring finger domain 203 245 IPR001841 -
Acco08g0151 265 PANTHER TARGET OF ERK KINASE MPK-1 1 252 - -
Acco08g0151 265 SMART ring_2 204 244 IPR001841 -
Acco08g0151 265 MobiDBLite consensus disorder prediction 171 196 - -
Acco08g0151 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 250 IPR013083 -
Acco08g0151 265 CDD RING-H2_PA-TM-RING 203 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0151 Acco-ChrAcco08 975557 978111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0151 1 265 C3H Transcription Factor Family AT3G55530 65.091 1.40e-112 323
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0151 08 975557 978111 Acco08g0151 08 975557 978111 ECH