Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0147 ATGGGGGAGGAGGTCAGGATGACCGATTACGATGGCGCTGCCCCCGATGATGATGAGAGAGTCCTCGAGTGGGAGCTGGGCCTTCCTGCTCTCGATGATCTTACTCCCCTCTCTCAGCCCTTGATCCCGCCGGAGCTCGCCTCTGCCTTCCGCATCATGCCGGAGCCCGGCCGCTCTCCCCTTGACGTTAATCGTGCCTCCCAGAATACTCTGACCTCTCTTCGTGGCGGAGGCTCTCAGGCCTTTTCCTCCAATAATTACAAGTCGCTCAACGATGATGGCTGTCGGGACCCCATCGTGGTGGAGGCCGACGAAGAGGCCGATCGCCACGGGTCGGGGTCCGATTCTCGGAAACTCAGAAAGATCGACTGCACCGAAGAAGCTGATTCGGCTCTGCGGATTGAGAATTCGACGGATGATCCGTCCGCCCGGACCTTAAAGCGGCCCCGGCTTGTATGGACTCCGCAGTTACACAGGCGCTTTGTGGATGTGGTGGCTCACCTGGGAATCAAGAGTGCGGTGCCGAAGTCGATTATGCAATTGATGAACGTCGAAGGACTGACCCGAGAAAATGTCGCCAGCCATCTTCAGAAGTATCGGCTTTACTTGAAGAGGATGCAAGGTTTATCCAACGAGGGTCCTTCATCGTCGGACCAGCTCTTCGCTTCCACTCCGGTACCTCAAAGTTTACACGATTCTGGTGGGAGTGGGCACTCTCATGGAAACGGGCATCTTCCGGTCCCGATTCCGATGATATATCCACCGCAAATGATGCCGATGCAGATTATTGGAATGCCCCATGGTCAGGGTCATCCGCATGCTCACATGGGAATGCCGATGGCCAATCATGGGTTCGACTCACATCCATATAATATGATGCAGCAAAGGGATTGGTCTGGCAATAAATTTGCTTCGGTTGTATCAGACCCTCACGTTACTACTAACGATAAATGA 954 0.5461 MGEEVRMTDYDGAAPDDDERVLEWELGLPALDDLTPLSQPLIPPELASAFRIMPEPGRSPLDVNRASQNTLTSLRGGGSQAFSSNNYKSLNDDGCRDPIVVEADEEADRHGSGSDSRKLRKIDCTEEADSALRIENSTDDPSARTLKRPRLVWTPQLHRRFVDVVAHLGIKSAVPKSIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSGGSGHSHGNGHLPVPIPMIYPPQMMPMQIIGMPHGQGHPHAHMGMPMANHGFDSHPYNMMQQRDWSGNKFASVVSDPHVTTNDK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0147 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 204 IPR017930 -
Acco08g0147 317 MobiDBLite consensus disorder prediction 210 236 - -
Acco08g0147 317 MobiDBLite consensus disorder prediction 210 245 - -
Acco08g0147 317 FunFam Two-component response regulator 144 207 - -
Acco08g0147 317 NCBIfam myb-like DNA-binding domain, SHAQKYF class 149 201 IPR006447 GO:0003677
Acco08g0147 317 Gene3D - 145 207 - -
Acco08g0147 317 Pfam Myb-like DNA-binding domain 152 200 IPR001005 -
Acco08g0147 317 SUPERFAMILY Homeodomain-like 145 205 IPR009057 -
Acco08g0147 317 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 12 290 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0147 Acco-ChrAcco08 960676 961629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0147 1 290 G2-like Transcription Factor Family AT3G46640 53.548 1.96e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco08g0147 Myb_DNA-binding 5.2e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0147 08 960676 961629 Acco08g0147 08 960676 961629 ECH