Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0137 ATGGTATTAGTGAAAGTCGGGTGGGAGGAGGAGAGAGAAAGAATAGAGCAGAAAATAATGGCGGAGGCAATCCTTACTGGCTGTAACAACAGGTGGTCTCTTCTGGGCATGACGGCTCTTGTTACCGGTGGAACCAAAGGAATCGGGTATGCTATTGTGGAGGAGTTGGCACAATTAGGAGCTGCGGTACACACTTGCTCCAGGAATGAATCTGATCTTAATGAATGCTTACAACGATGGAACGCTAAGGGGTTTCAAGTTACTGGTTCTGTTTGCGATATGGTGTCCTCTGCTCAAAGACAAGACCTTATAACTAAAGTCTCCTCTCTGTTTCACGGCAAACTTAATATCCTTGTGAACAACGCGGGAGCATACAGGCCAAAACCAACCCTAGACTATACAGCAGAAGATTTCTCATTTCTGATGAGTACAAATTTGGAATCAGCATACCATATAAGCCAACTTGCACATCCTCTTCTAAAAGCTTCAAAAGCTGCAAGCATTGTTTTTATATCCTCCGTTGCTGGGGTGTCAGCTATAAACGGAACATCAATATATGGTGCAACAAAAGGAGCAATGAACCAGCTAACCAAGAACCTGGCATGTGAGTGGGCGAAAGACAATATAAGGACCAATTGCATTGCACCAGGCCCCATTAAGACACGCGTCACTAAAGATTTTCTCAAAGATGAAAAGGCACGAGAGACTTTCATGAAGAGAATCCCTTTGCAACGGATTGGGGAGCCAGACGAGGTGTCTTCCATGGTGGCATTCCTCTGCTTACCAACAGCCTCATACATAACGGGGCAGATCATTTGCATCGACGGAGGATTTACAGTGTTTGGTTTGTAA 852 0.4484 MVLVKVGWEEERERIEQKIMAEAILTGCNNRWSLLGMTALVTGGTKGIGYAIVEELAQLGAAVHTCSRNESDLNECLQRWNAKGFQVTGSVCDMVSSAQRQDLITKVSSLFHGKLNILVNNAGAYRPKPTLDYTAEDFSFLMSTNLESAYHISQLAHPLLKASKAASIVFISSVAGVSAINGTSIYGATKGAMNQLTKNLACEWAKDNIRTNCIAPGPIKTRVTKDFLKDEKARETFMKRIPLQRIGEPDEVSSMVAFLCLPTASYITGQIICIDGGFTVFGL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0137 283 PRINTS Glucose/ribitol dehydrogenase family signature 207 224 IPR002347 -
Acco08g0137 283 PRINTS Glucose/ribitol dehydrogenase family signature 242 262 IPR002347 -
Acco08g0137 283 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Acco08g0137 283 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Acco08g0137 283 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Acco08g0137 283 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Acco08g0137 283 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 173 201 IPR020904 GO:0016491
Acco08g0137 283 Gene3D - 20 282 - -
Acco08g0137 283 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 281 IPR036291 -
Acco08g0137 283 Pfam Enoyl-(Acyl carrier protein) reductase 45 279 - -
Acco08g0137 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 IPR002347 -
Acco08g0137 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Acco08g0137 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Acco08g0137 283 PANTHER TROPINONE REDUCTASE 30 280 IPR045000 GO:0016491
Acco08g0137 283 FunFam Short-chain dehydrogenase reductase 21 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0137 Acco-ChrAcco08 917367 918771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0137 29 283 Miscellaneous Gene Families AT2G29290 63.922 2.60e-118 338