Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0135 ATGGCGTCCCAAAATCCTTCTCAACCGGCGAAACTACGGTGGGGCGAACTGGATGAGGATGACGGCGAGGATCTTGATTTTTTGCTTCCGCCGCGACAGGTCATAGGCCCCGATGAGAACGGCATAAAAAAGGTGATCGAGTACAAATTCAACGAAGATGGCAATAAGGTGAAGATCACTACCACCACTCGTACTCGCAAGCTTGCTAACGCTCGCCTCAGTAAGCGGGCCATTGAGAGGCGATCCTGGGCTAAGTTCGGCGATGCTGTTCATGAGGATGTTGGCAGCAGGCTCACCATGGTCTCCACAGAGGAGATCCTCCTTGAGCGACCTAGGGCTCCGGGTAGCAAACAAGAAGAACCGAAGGCTTCTGGAGACCCATTGGCTCAATTCCAAAAAGGTGCTGTTCTCATGGTTTGTAGAACTTGTGGGAAGAAGGGAGACCATTGGACTTCAAGGTGTCCATACAAGGATCTTGCCCAGCCGATGGAAGGATTCACTGATAAGCCTGCTGCATCAGAAGCTGCCACTATAGCTTCTGGTCCAACCAAGGGAGCATATGTTCCTCCTAGTATGAGAGCAGGCGCAGAGAGAACTAGTGGATCAGATATGAGGCGAAGGAATGATGAAAATTCTGTCCGGGTCACTAATCTCTCTGAGGATACAAGAGAGGCTGACTTGCATGAACTGTTCCGTCCTTTTGGTGCTGTGAGCAGAGTCTATGTAGCTCTTGATCAAAGGACTCAAGTGAGCAGAGGCTTTGGCTTCGTTAACTTTGTGAACAGGGACGACGCCCAGAAAGCAATTAACAAATTAAATGGCTATGGTTATGACAGTCTCATCCTTAGAGTTGAGTGGGCCACTCCAAGAGCGAACTAA 879 0.4983 MASQNPSQPAKLRWGELDEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFNEDGNKVKITTTTRTRKLANARLSKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKQEEPKASGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPMEGFTDKPAASEAATIASGPTKGAYVPPSMRAGAERTSGSDMRRRNDENSVRVTNLSEDTREADLHELFRPFGAVSRVYVALDQRTQVSRGFGFVNFVNRDDAQKAINKLNGYGYDSLILRVEWATPRAN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0135 292 CDD eIF3G 40 158 IPR024675 -
Acco08g0135 292 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 11 291 IPR017334 GO:0003743|GO:0005737|GO:0005852
Acco08g0135 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 211 289 IPR000504 GO:0003723
Acco08g0135 292 PIRSF Transl_init_eIF-3_RNA-bind 3 292 IPR017334 GO:0003743|GO:0005737|GO:0005852
Acco08g0135 292 FunFam Eukaryotic translation initiation factor 3 subunit G 175 292 - -
Acco08g0135 292 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 18 288 - -
Acco08g0135 292 SMART rrm1_1 212 285 IPR000504 GO:0003723
Acco08g0135 292 Pfam Eukaryotic translation initiation factor 3 subunit G 33 159 IPR024675 -
Acco08g0135 292 MobiDBLite consensus disorder prediction 181 212 - -
Acco08g0135 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 213 278 IPR000504 GO:0003723
Acco08g0135 292 CDD RRM_eIF3G_like 212 287 IPR034240 -
Acco08g0135 292 Gene3D - 168 292 IPR012677 -
Acco08g0135 292 SUPERFAMILY RNA-binding domain, RBD 197 291 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0135 Acco-ChrAcco08 907643 909683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0135 1 290 Eukaryotic Initiation Factors Gene Family AT3G11400 67.290 5.90e-153 429