Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0121 ATGGGAGGTCGTTGCTCGAAATTCTCACTATGCTGGTGGTCCTCTAATATCAAATCAAATCTTCATGACTTGTCTGACAATGATGATGGGAACAAGAATGAGAAACCTGGAATCATAGAATATAGCTTGGATCAACTAAGAAGTGCCACTTCTGGATTTTCACCCGATAACGTTGTGTCAGAGCACGGTGAGAAAGCTCCCAATGTTGTCTATAAAGGAAAGCTTGAAGATGACAGCTGGGTTGCTGTGAAGCGCTTCAACAGGTCGGCTTGGCCTGATCCTCGACAATTCCTGGAGGAAGCACGAGAAGTGGGGCAGCTGCGGAATGAGCGATTGGCCAACTTAATAGGGTGTTGCTGCGAAGGGGAAGAGAGACTGCTTGTTGCTGAGTTTATGCCCAATGAGACTCTCTCCAAACATCTTTTTCATTGGGAGACCCAGCCTATGAAATGGGCAATGAGGCTGAGAGTGGCCTTTTACTTAGCACAGGCTTTGGAATACTGCAGTAGCAGAGGACGGGCATTGTACCACGATCTTAATGCTTATAGAATTCTGTTTGATGAGGATGGCAATCCCAGACTCTCCTGTTTTGGGCTCATGAAGAACAGCAGGGATGGCAAGAGTTATAGTACAAACTTAGCCTTCACCCCTCCAGAGTACTTGAGGACTGGAAGGATTACCCCAGAAAGTGTTATATACAGTTTTGGTACCCTTTTGCTTGATCTTCTCAGTGGCAAACATATTCCACCGAGTCATGCACTTGATCTTATACGAGGGAAAAACTTTTTGATGCTCATTGATTCATGTCTGGAAGGCCATTTTTCAAGTGATGATGGAACAGAACTTGTGAGATTAGCTTCACGTTGTTTACAGTATGAACCTCGTGAGAGGCCTAATGCCAAGTCACTCGTGACTGCTCTAGCTCCTCTTCAGAAAGAAACTTCTGTACTATCAAAAGTTTTGATGGGCATACCAGATGGGATTACATCAACAAGAGAAACAGTTTCCTTGACACCTTTTGGCGAAGCTTGTTCTAGAAGAGATTTCACGGCAATACATGAAATTTTGGAAAGGGTTGGGTACAAGGATGACGAAGACGTTGCAAATGAGCTTTCATTCCAAATGTGGACGAATCAAATACAAGAAACTCTGAATTCTAAGAAGCAAGGAGATTCTGCTTTTCGTGCCAAAGACTTTTCTACGGCTATTGACTACTATACACAATTCATCGATGTAGGGACTATGGTGTCGCCAACTGTGTATGCGAGGCGCTGCTTATGTTACTTGATGAACGATATGGCTCAAGAAGCTCTTGGAGATGCCATGCAAGCCCAATCAGTGTCACCCACGTGGCACACTGCTTTCTATCTTCAAGCAGCTGCCCTCTTCAGCCTTGGAATGGACAATGATGCACAGGAAAGTCTTAAAGATGGCACAATGCTGGAAACTAGAAAGCCCAGAAATTGA 1467 0.4444 MGGRCSKFSLCWWSSNIKSNLHDLSDNDDGNKNEKPGIIEYSLDQLRSATSGFSPDNVVSEHGEKAPNVVYKGKLEDDSWVAVKRFNRSAWPDPRQFLEEAREVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVAFYLAQALEYCSSRGRALYHDLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLIDSCLEGHFSSDDGTELVRLASRCLQYEPRERPNAKSLVTALAPLQKETSVLSKVLMGIPDGITSTRETVSLTPFGEACSRRDFTAIHEILERVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFRAKDFSTAIDYYTQFIDVGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSVSPTWHTAFYLQAAALFSLGMDNDAQESLKDGTMLETRKPRN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0121 488 FunFam probable serine/threonine-protein kinase At4g35230 381 488 - -
Acco08g0121 488 Pfam Protein tyrosine and serine/threonine kinase 70 307 IPR001245 GO:0004672|GO:0006468
Acco08g0121 488 SUPERFAMILY TPR-like 385 484 IPR011990 GO:0005515
Acco08g0121 488 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 486 IPR045845 GO:0004672|GO:0009742
Acco08g0121 488 FunFam probable serine/threonine-protein kinase At4g35230 28 131 - -
Acco08g0121 488 FunFam probable serine/threonine-protein kinase At5g41260 133 324 - -
Acco08g0121 488 SUPERFAMILY Protein kinase-like (PK-like) 33 310 IPR011009 -
Acco08g0121 488 ProSiteProfiles Protein kinase domain profile. 56 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0121 488 Gene3D Transferase(Phosphotransferase) domain 1 133 325 - -
Acco08g0121 488 Gene3D Tetratricopeptide repeat domain 381 488 IPR011990 GO:0005515
Acco08g0121 488 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0121 Acco-ChrAcco08 827644 831081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0121 41 308 Glycoside Hydrolase AT3G07070 33.784 2.72e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Acco08g0121 PK_Tyr_Ser-Thr 1.8e-26 CL0016