Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0104 ATGGGCTCAATGAACTCAAACAACTGGCTTTCTTTCCCTCTTTCCCCTACTCAGTCTTCCTTGCCACCACAACTCCAAGCCACTCAGTCCCATCAGTTTTCTCTTGGCTTAGTCAATGATTCCATAGAAAGCCCATTCCAAAATCACGATTGGAATCTGATGAACACACATACACACGGGGGGAACAACGTGAATGAAGTGCCGAAGGTAGCAGATTTTCTAGGAGTGGGCAAGTCTGAGAATCAGTCAGATCTTGCAGCCTTTAATGAAATTCATCACTCGAATGATTCGGGTTACCTATTCACAAACGCCAGTTTGGTACCACCGATGCAAACCTCAGTGGTGGCCACATCTGCCAACTTCGAGTATCAAGAAAACAACAATGCTAACAATAACCTCCAGTCTTTGACATTATCCATGGGTAGTGGTGGTAAGGATTCTACCTGTGAAACTAGCGGTGACAATAGTACCAATACTGCTGTGGAAACTGCTGCCCCTCGAAGAACTTTAGATACATTCGGTCAGAGAACTTCAATCTATCGAGGTGTAACCAGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGACAATAGTTGTAGACGGGAAGGACAATCACGAAAGGGACGACAAGGTGGATATGACAAAGAAGAGAAAGCAGCTAGGGCCTACGATTTAGCGGCACTAAAGTACTGGGGAACATCCACAACTACCAACTTTCCAATCAGCAACTATGAGAAGGAACTGGAGGAGATGAAGCACATGACAAGACAAGAATTTGTGGCCGCCATACGGAGGAAAAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCACCATCAACATGGTAGATGGCAGGCAAGGATCGGTAGAGTTGCGGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATATGACATAGCGGCGATCAAGTTCAGAGGACTAAACGCAGTGACAAACTTCGACATGAGCCGTTACGACGTGAAAGCCATACTTGAGAGTAACACTCTTCCAATCGGAGGAGGGGCTGCTAAACGACTGAAGGAAGCTCAAGCTCTGGAATGTTCCAGAAAAAGAGAAGAAATGATAGCTCTCGGGTCGACCTTCCAATACGGCAGCGGGAGCGGCGGCGGCAGCGGCTCGAGCCGGCTTCAACTACAAGCCTACCCTCTGATGCAGTTGGATCAGACGCAGCCATTGTTAAGCCTACAAAACCAGGCGGAGATATCTCAGTACTCGTCACTTCATCATCCCAGTTATATCCAAACTCAGCTCCAGTTGCACCACCAAACTGCTTCTTCGTCTAACTATAACTTCCACCAATCGCCGAGTAATAATTCTCAGCTTTATAATAGCTATCTTCAGAACCACCCGGCTCTGCTTCAGGGTTTTATGAACATGGGTTCTTGTTCTTCTTCTGTGATGGACAATGATGGTGGAGGGTCTGGTGGGAGTTACAGTGGTGGTGGTGGAGGGTTTATGGGGATGGCTTCTAATACGACGTCAGGTGGATCCGCGGAGGAGCTGGCGCTGGTCAAGGTAGAAAACTACAACATGCCGTCCGGTGGTTATGGCGGCGGCTGGCCGTCCGAGTCCATGCAGGGATCCAATGCTGCTCTCTTTACAATGTGGAATGACTGA 1683 0.4801 MGSMNSNNWLSFPLSPTQSSLPPQLQATQSHQFSLGLVNDSIESPFQNHDWNLMNTHTHGGNNVNEVPKVADFLGVGKSENQSDLAAFNEIHHSNDSGYLFTNASLVPPMQTSVVATSANFEYQENNNANNNLQSLTLSMGSGGKDSTCETSGDNSTNTAVETAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSTFQYGSGSGGGSGSSRLQLQAYPLMQLDQTQPLLSLQNQAEISQYSSLHHPSYIQTQLQLHHQTASSSNYNFHQSPSNNSQLYNSYLQNHPALLQGFMNMGSCSSSVMDNDGGGSGGSYSGGGGGFMGMASNTTSGGSAEELALVKVENYNMPSGGYGGGWPSESMQGSNAALFTMWND 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0104 560 SUPERFAMILY DNA-binding domain 178 244 IPR016177 GO:0003677
Acco08g0104 560 MobiDBLite consensus disorder prediction 142 161 - -
Acco08g0104 560 PRINTS Ethylene responsive element binding protein signature 318 338 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 PRINTS Ethylene responsive element binding protein signature 180 191 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 Pfam AP2 domain 179 234 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 Pfam AP2 domain 279 328 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 112 427 - -
Acco08g0104 560 ProSiteProfiles AP2/ERF domain profile. 278 336 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 Gene3D AP2/ERF domain 179 244 IPR036955 GO:0003700|GO:0006355
Acco08g0104 560 Gene3D AP2/ERF domain 278 338 IPR036955 GO:0003700|GO:0006355
Acco08g0104 560 CDD AP2 277 338 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 SMART rav1_2 278 342 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 SMART rav1_2 179 248 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 ProSiteProfiles AP2/ERF domain profile. 179 242 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 CDD AP2 178 244 IPR001471 GO:0003700|GO:0006355
Acco08g0104 560 FunFam AP2-like ethylene-responsive transcription factor ANT 178 244 - -
Acco08g0104 560 FunFam AP2-like ethylene-responsive transcription factor 277 338 - -
Acco08g0104 560 SUPERFAMILY DNA-binding domain 277 338 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0104 Acco-ChrAcco08 736427 739221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0104 4 560 AP2-EREBP Transcription Factor Family AT1G51190 63.406 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco08g0104 AP2 2.6e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0104 08 736427 739221 Acco08g0104 08 736427 739221 ECH