Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0103 ATGGAATCTTTAACTCCACCCTCGCCGGAGCTCCACCTCAACAATCTCAGGGCGCTCAAAGTCCTCGGTAAGGGTGGCATGGGCACCGTCTTCCTTGTCCATGACACCTCAACCGATCCCTCCGCCCGCTCCCCCTTCGCTCTCAAGGTCCTCGACAAATCTTCCATTAATTCCCACCACACCACCCTCGATGCCGATCGCCGTGCCCGCTGGGAAATCCAGGTCCTCACTCGTTTGTCCCACCCCTTCCTCCCTTCCCTCCTCGGAACTGTCGAGTCCGACCAGCTTCTCGGTTGGGCCGTTCCTTATTGCCCTGGTGGTGATCTTCACCTTCTCCTCCACCGCCAAGTTGATCGGGTTTTCTCCCCCGCGGTCATCCGCTTCTATTTGGCAGAGATCCTCTGCGCCCTCGACCATCTTCACAGCATTGGTGTCGCCTACCGCGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCCGGCCACGTCACTCTCACCGACTTCGATCTCTCTCATAAGCTCAACCCCAAATCCATCAAAACGGTCATTTCTTCAACGCAAGCTCAAGACAATTTCCCCGAAATCCGCCGGAAAAATCGCCGGAACATGAGGCGATGGTTCCCCGCCGCACCGGAGAACAAGAAGGGGCTGAAGAAGGCGAAGTCGGCCCGAGTCAGCCCGGTGAGTCGACGGAAGCTGAGTTTCTCAAGTGGTGAGAAGTCTAACTCGTTTGTGGGCACGGAAGAGTACGTATCACCGGAGGTAGTGCGCGGCGACGGTCACGAGTTTGCCGTTGATTGGTGGGCCCTGGGAATATTAGCTTACGAGTTGTTATACGGTACGACGCCGTTCAGGGGGAGTAACCGGAAGGAAACTTTTCGGAACGTTCTGTTCAAAACACCAGAATTCATAGGAAAGCGGTCGGTACTAACGGATTTGATTGAGCGGTTGCTGGAGAAGGATCCCACAAAGCGGTTGGGCTACGTGCGAGGCGCGTGCGAGATTAGGGAGCACGAATTCTTCAGAGGGGTACAATGGGACCTACTGACGGAGGTAGTGAGACCGCCGTTCATTCCGCCCAGAGAGGACAGCGTCGACTTGACGGCCAACGGTATGGACATAACTGATTACTTCCGCAACCTGAAATCGCCGCCGTCGTTGCCTGCATCGCCGTCTTCTGAGTATCAGAGGAATATCTCATACGAAGAATTTTGA 1215 0.5539 MESLTPPSPELHLNNLRALKVLGKGGMGTVFLVHDTSTDPSARSPFALKVLDKSSINSHHTTLDADRRARWEIQVLTRLSHPFLPSLLGTVESDQLLGWAVPYCPGGDLHLLLHRQVDRVFSPAVIRFYLAEILCALDHLHSIGVAYRDLKPENVLIQQSGHVTLTDFDLSHKLNPKSIKTVISSTQAQDNFPEIRRKNRRNMRRWFPAAPENKKGLKKAKSARVSPVSRRKLSFSSGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYELLYGTTPFRGSNRKETFRNVLFKTPEFIGKRSVLTDLIERLLEKDPTKRLGYVRGACEIREHEFFRGVQWDLLTEVVRPPFIPPREDSVDLTANGMDITDYFRNLKSPPSLPASPSSEYQRNISYEEF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0103 404 Gene3D Transferase(Phosphotransferase) domain 1 108 181 - -
Acco08g0103 404 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
Acco08g0103 404 PANTHER FLIPPASE KINASE 1-RELATED 10 366 - -
Acco08g0103 404 FunFam Serine/threonine-protein kinase UCNL 16 107 - -
Acco08g0103 404 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Acco08g0103 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Acco08g0103 404 ProSiteProfiles AGC-kinase C-terminal domain profile. 342 404 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco08g0103 404 Gene3D Phosphorylase Kinase; domain 1 16 107 - -
Acco08g0103 404 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0103 404 Gene3D Transferase(Phosphotransferase) domain 1 238 360 - -
Acco08g0103 404 Pfam Protein kinase domain 19 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0103 404 Pfam Protein kinase domain 236 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0103 404 SUPERFAMILY Protein kinase-like (PK-like) 13 393 IPR011009 -
Acco08g0103 404 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0103 404 FunFam Serine/threonine-protein kinase OXI1 108 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0103 Acco-ChrAcco08 720421 721635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0103 11 404 AGC Kinase Gene Family AT3G20830 59.214 2.15e-160 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco08g0103 Pkinase 1.1e-31 CL0016