Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0101 ATGGAGTCAGATCTTGAGCACCACTCTTCAATGTTACGTGGTCATCAGCAGCAGCAGATGAATTCTGGTTTGACACGGTTTCGATCGGCGCCAAGCTCGTATTTCACGAATATCATAGACAAGGAATTATACGAGGACATGTTTAGTCGGCCTTCCAGCCCCGAAACGGACCGAATCTTTTCACGGTTTATGAATAGCCTGGCTAACGAGTCAGAAGATGCACCAGCTCAATATCTTACATCTGCTCAACAAATTTCTGCAGTGAAGGAAGAGATGGATCAACAGCCTCAGGTTATGCCTTCCGTGAATGATGAACCGGTGGCTCTCCACCCACCACCGCCACCGCCGCAGCTGCAGCATAGCAATATCAGTAATTTTGTTTCTGCTCCACAGAATCTTTTCCAAAGCTCAGGACGTCCACCTTTGCCGAATCAGAGCCTGACTTCATCAGCTATGGACGGAGTCTATTCGACGGGAGGTCATCGATTGCCACATGTGAAGACTCCTGATGCAAATAATTCCAATCTTATCAGGCACAATAGCTCACCTGCAGGATTCTTTTCCACCTTAAACATTGAAAGCTATGCTTCTACGAGGGGCAAAGGCATATTGGGCGTTGGTAATAGCGCGAGCGAAGAAGCAAACTTCTCTTCTGCGGTGGGGATGAAAAATCCGCCAAAATACTCAACAGGCCTAATGTCATCCATCGCTGAATTTGGGGACAAAGGCGACACCGAGCAAGATCAAGACACTGAATCTTTTGCCGAAAGCCAAGGTAATGAGTTTATCACAGGTTTCCCCTCAGGTCCTTGGGACGATTCTGCACTCATGTCTGACAATACTGCTGGACTAGAAAGATTTAGAGACGAGGATGCAAAAACATTTTCTGAGACTCAGAACGAGTCAGGCAGCCAGCCTCGTCCTGCTCCTTTGGCTCATCACTTCAGTTTGCCAAAAACTTCAGCAGAAATGGCAGTCATTGAAAAGTTTCTGCAGTCCTCAGATTCTGTTCCCTGTAAAATTCGTGCCAAGAGAGGCTGTGCTACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAGATCAGTGAGCGTATGAGGAAGCTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGAGCTGGCTGTAGACTACATTAAAGACCTTCAAAAGCAAGTTGAGACGCTTTCAGACAGTCACGCAAAGTGCACGTGTCCACACAAGCAGTTAGTAAAGAGGAGATGTGCTGTGGTGTTGTGTGGGGCTCGCTTTCGCATTAAATGGCAAATGGCAGAGAGAAACATCTTGGAGGGTCCGACGAGGCCATATTTGGGTTCTGCTTTTTCCCATTTGGGTGTCTCCAATAATATAATGTCCGTTTCGGTGGTGGCTATTCCATTTTCGAAACTCATTATCCTAATCCATTTGAGTGGTGGCTATTGCCTCTCGCCCTTTTAG 1482 0.469 MESDLEHHSSMLRGHQQQQMNSGLTRFRSAPSSYFTNIIDKELYEDMFSRPSSPETDRIFSRFMNSLANESEDAPAQYLTSAQQISAVKEEMDQQPQVMPSVNDEPVALHPPPPPPQLQHSNISNFVSAPQNLFQSSGRPPLPNQSLTSSAMDGVYSTGGHRLPHVKTPDANNSNLIRHNSSPAGFFSTLNIESYASTRGKGILGVGNSASEEANFSSAVGMKNPPKYSTGLMSSIAEFGDKGDTEQDQDTESFAESQGNEFITGFPSGPWDDSALMSDNTAGLERFRDEDAKTFSETQNESGSQPRPAPLAHHFSLPKTSAEMAVIEKFLQSSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLELAVDYIKDLQKQVETLSDSHAKCTCPHKQLVKRRCAVVLCGARFRIKWQMAERNILEGPTRPYLGSAFSHLGVSNNIMSVSVVAIPFSKLIILIHLSGGYCLSPF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0101 493 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 397 IPR011598 GO:0046983
Acco08g0101 493 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 82 413 - -
Acco08g0101 493 Gene3D - 348 419 IPR036638 GO:0046983
Acco08g0101 493 SMART finulus 353 403 IPR011598 GO:0046983
Acco08g0101 493 FunFam Transcription factor bHLH130 family 348 417 - -
Acco08g0101 493 MobiDBLite consensus disorder prediction 294 313 - -
Acco08g0101 493 Pfam Helix-loop-helix DNA-binding domain 352 398 IPR011598 GO:0046983
Acco08g0101 493 MobiDBLite consensus disorder prediction 1 23 - -
Acco08g0101 493 MobiDBLite consensus disorder prediction 90 121 - -
Acco08g0101 493 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 414 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0101 Acco-ChrAcco08 701388 704152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0101 1 413 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.480 6.57e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco08g0101 HLH 1.8e-10 No_clan