Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0092 ATGCAGAAGTCACCACAGCCTCAAGACTTTACTCTGAAAGAGACCTCTCCCAAAATTGGGGCAGGGTCCTTCACAGGGGACAAGCTGTCATGCACCTATGACCTTGTGGAACAAATGTTGCATCTGTATGTTCGTGTGGTGAAAGCCAAGGATTTACCTGGGAAGGATGTCACTAGTAGTTTGGACCCCTATGTGGAAGTGAAACTTGGGAACTACAAGGGCCTTACCAAGCATTTTGAGAAGAAGTCAAATCCTCAGTGGAACCAGGTTTTCGCTTTCTCACAAGATCGAATTCAAGCTTCAGTATTGGAAGTGGTTGTGAAGGATAAGGATGTTGTTGTGGATGACTTTGTAGGGAGGGTCTTGTTCGACTTGAACGAGATCCCAAAGCGTGTTCCCCCTGACAGTCCATTGGCTCCACAATGGTATAGGCTCGAAGACCGGAAGGGTGTTAAGGCTAAGGGAGAGATAATGCTGGCTGTATGGATAGGAACACAAGCAGATGAGGCATTTCCTGATTCGTGGCACTCTGATGCAGCATCAATTGGTCCTGAGGCAGTTGTAAACATAAGATCCAAGGTTTATCTTTCTCCCAAGCTTTGGTATGTGAGGGTCAATGTTATTGAAGCTCAAGACTTGGTACCAAATGATAAAAGCCGGTATCCTGAAGTGTTTGTGAAGGTGAAACTTGGAAACCAGCTTCTGAGAACTAGGATATCTCCGAGTAAGAGTATAAATCCTATGTGGAATGAGGACTTGATGTTTGTTGCAGCTGAACCATTTGAGGAACCTTTGATGCTGACTGTGGAAGACAGAGTTGGATCAAACAAAGATGAAATCTTGGGAAAGTGTGTGATTCCTCTACAGATTGTGCAAAGAAGGTTAGACCATAAGCCCGTGAACACTAGGTGGTTCAATCTTGAGAAGCACGTGGTTGGTGAAGGGGAACAAAAGAAAGAGACCAAATTTGCAAGTAGGGTGCATTTGAGGGTGTGCTTGGATGGTGGGTATCATGTGCTGGATGAATCAACTCATTACAGCAGTGATCTTAGGCCAACTGCAAAACAGCTTTGGAAGTCCAGCATTGGAATTTTGGAAGTTGGTATTATTAGCGCGCATGGGCTGATACCAATGAAGACAACAGATGGTCGAGGAACAACAGATGCGTATTGTGTAGCTAAATATGGGCAGAAATGGATCCGTACGAGGACAATTGTTGATAGCTTTGCTCCAAGGTGGAATGAACAGTATACCTGGGAAGTTTTTGATCTATGCACTGTTATTACAATAGGGGTTTTTGACAATGGTCACATACACGGAGGGGACAAGTCTGGAGGTTCAAAGGATTTAAAGATAGGGAAGGTGAGGATTCGCCTGTCCACCCTTGAATCAGATAGGGTTTATACACACTCATACCCTCTTCTAGTGCTGGATACTTCAGGTGTGAAGAAAATGGGCGAATTGCAATTGGCTGTGAGGTTCACAGGCTCATCTTTATTTAATATGTTATATAGGTATTCACAGCCATTGTTGCCCAAGATGCACTACATCCATCCTTTATCTGTGATTCAGCTGGACAATTTGAGGCATCAGGCCACGCAGATTGTGTCCATGAGGCTGAGCCGAGCCGAGCCACCTCTAAGGAAAGAGGTAGTGGAATACATGTTAGATGTAGATTCACATATGTGGAGCATGAGAAGAAGCAAAGCTAATTTCTTTAGAATCATGAAAGTTCTAAGTGGGTTGATCGCCATTGGGAGGTGGTTTGATCAAATATGCAATTGGAGAAACCCTCTCACAACCATTCTGATTCATATCCTTTTCATAATACTGGTTCTCTACCCAGAGCTAATACTTCCCACAATATTCTTGTACTTGTTCTTGATTGGAATCTGGAACTTCCGGTGGAGGCCGAGGCACCCTCCCCACATGGACACCAGATTGTCTCATGCCGATGTTGCTTATCCTGATGAACTGAATGAAGAGTTTGATACATTCCCAACTTCTCGCCCTTCAGATATCGTTAGGATGAGGTACGATCGTTTGAGGAGCATAGCAGGTAGGGTTCAGACCGTGGTAGGCGACTTAGCCACTCAAGGAGAGAGGTTTCAGAGTTTGTTAAGTTGGAGAGATCCAAGGGCCACAGCTCTGTTTTTGACATTCTGTTTCATTGCAGCTATAGTTCTCTATGTTACTCCCTTCCAAGTGGTGTGCCTTCTCATGGGCTTCTATGTGCTGAGGCATCCCCGGTTCCGTCATAAACTTCCATCAGTTTCCCTCAACTTCTTTAGGAGGTTGCCTGCTAGATCAGATTGCTTGTTGTAA 2325 0.4465 MQKSPQPQDFTLKETSPKIGAGSFTGDKLSCTYDLVEQMLHLYVRVVKAKDLPGKDVTSSLDPYVEVKLGNYKGLTKHFEKKSNPQWNQVFAFSQDRIQASVLEVVVKDKDVVVDDFVGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGVKAKGEIMLAVWIGTQADEAFPDSWHSDAASIGPEAVVNIRSKVYLSPKLWYVRVNVIEAQDLVPNDKSRYPEVFVKVKLGNQLLRTRISPSKSINPMWNEDLMFVAAEPFEEPLMLTVEDRVGSNKDEILGKCVIPLQIVQRRLDHKPVNTRWFNLEKHVVGEGEQKKETKFASRVHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWKSSIGILEVGIISAHGLIPMKTTDGRGTTDAYCVAKYGQKWIRTRTIVDSFAPRWNEQYTWEVFDLCTVITIGVFDNGHIHGGDKSGGSKDLKIGKVRIRLSTLESDRVYTHSYPLLVLDTSGVKKMGELQLAVRFTGSSLFNMLYRYSQPLLPKMHYIHPLSVIQLDNLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLSGLIAIGRWFDQICNWRNPLTTILIHILFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADVAYPDELNEEFDTFPTSRPSDIVRMRYDRLRSIAGRVQTVVGDLATQGERFQSLLSWRDPRATALFLTFCFIAAIVLYVTPFQVVCLLMGFYVLRHPRFRHKLPSVSLNFFRRLPARSDCLL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0092 774 ProSiteProfiles C2 domain profile. 184 305 IPR000008 -
Acco08g0092 774 FunFam C2 domain-containing protein 36 180 - -
Acco08g0092 774 Pfam C2 domain 363 474 IPR000008 -
Acco08g0092 774 Pfam C2 domain 41 134 IPR000008 -
Acco08g0092 774 Pfam C2 domain 201 307 IPR000008 -
Acco08g0092 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Acco08g0092 774 Gene3D C2 domain 187 332 IPR035892 -
Acco08g0092 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Acco08g0092 774 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Acco08g0092 774 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 5 774 IPR047259 -
Acco08g0092 774 FunFam C2 domain-containing protein 188 333 - -
Acco08g0092 774 CDD C2C_MCTP_PRT_plant 202 352 IPR047258 -
Acco08g0092 774 SMART C2_3c 41 137 IPR000008 -
Acco08g0092 774 SMART C2_3c 364 471 IPR000008 -
Acco08g0092 774 SMART C2_3c 202 300 IPR000008 -
Acco08g0092 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Acco08g0092 774 Gene3D C2 domain 361 498 IPR035892 -
Acco08g0092 774 Gene3D C2 domain 33 164 IPR035892 -
Acco08g0092 774 FunFam C2 domain-containing protein 346 497 - -
Acco08g0092 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Acco08g0092 774 CDD C2B_MCTP_PRT_plant 42 165 IPR047257 -
Acco08g0092 774 CDD C2D_MCTP_PRT_plant 364 491 IPR047255 -
Acco08g0092 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 498 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0092 Acco-ChrAcco08 643953 646277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0092 1 774 Lipid Metabolism Gene Families AT3G57880 81.290 0.0 1353