Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0055 ATGAAAATCCAGTGCGATGTGTGTGAGAAAGCTCCGGCAACGGTGATTTGTTGCGCCGACGAGGCTGCTTTATGTGCTAAATGCGATATTGAAGTTCATGCTGCCAACAAGCTAGCCAGCAAGCACCAGAGGCTTCTCCTTCAGTGCCTCTCTACCAAGCTTCCCACTTGTGACATCTGCCAAGACAAGCCAGCTTTTATATTTTGTGTTGAAGACAGAGCACTGTTCTGTGAAGCATGTGATGAACCGATTCATTCAGCTGGCAGCCTTTCTGCAAACCACCAGCGCTTCCTTGCAACTGGTATCCGGGTGGCTCTGAGTTCTAACTGCTCCAAGGACAATGAAGAACGCCGCTTGGAGCCACCAAATCGAAGTGCTCAACAAGCTCCTGCAAAAGTCCCTCCTCAGCAAGTCCCTACCTTCCCATCCTCTTGGGCAGTGGATGACTTGTTGGAATTTACTGACTTCGAATCACCTGACAAGAAGGAATCGCTGGGGTTTGGAGAGCTAGAGTGGTTATCGGACGTGGGCCTTTTTGGAGAACAATTCGCTGAGGAGGCATTGGCTGCAGCCGAAGTTCCACAGCTTCCAGTAACACAAACTAGCAATGTTGCCTCGTACAGACCCTCCAAGTCCTTCACGTCTCTCAAAAAGCCCAGGATTGAATTTGAAGACGATGATGAGCACTTTACTGTGCCTGACCTTGGTTGA 711 0.4965 MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSTKLPTCDICQDKPAFIFCVEDRALFCEACDEPIHSAGSLSANHQRFLATGIRVALSSNCSKDNEERRLEPPNRSAQQAPAKVPPQQVPTFPSSWAVDDLLEFTDFESPDKKESLGFGELEWLSDVGLFGEQFAEEALAAAEVPQLPVTQTSNVASYRPSKSFTSLKKPRIEFEDDDEHFTVPDLG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0055 236 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 235 - -
Acco08g0055 236 CDD Bbox1_BBX-like 5 47 - -
Acco08g0055 236 SMART bboxneu5 52 99 IPR000315 GO:0008270
Acco08g0055 236 SMART bboxneu5 4 47 IPR000315 GO:0008270
Acco08g0055 236 Gene3D Classic Zinc Finger 1 92 - -
Acco08g0055 236 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Acco08g0055 236 MobiDBLite consensus disorder prediction 113 138 - -
Acco08g0055 236 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Acco08g0055 236 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
Acco08g0055 236 CDD Bbox1_BBX-like 57 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0055 Acco-ChrAcco08 447193 448738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0055 1 161 Orphan Transcription Factor Family AT1G06040 68.452 4.61e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Acco08g0055 zf-B_box 6.1e-08 No_clan