Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco08g0031 | ATGGCAGTGAATGATGCTGACCAGGCGCACAAGCTTCACAGGTCTCGTCAGTCTGGTGCAAAGAAGGCCAAATCGGATAAGAAGAAGAAGAAGCAAGAAGTTGACGATGATAATCACAAACAAAATCCTAAGGCGTTTGCTTTTGCGTCGTCCGCGAAAGCCAAAAGATTACAATCCCGTGCTGTCGAAAAAGAGCAGCGTCGTCTTCATGTTCCTATTATTGACCGGTCTTATGGTGAGCCAGCACCTTATGTCGTCGTGGTGCAGGGCCCTCCGAAGGTTGGGAAGTCGCTCTTAATAAAGTCCTTGGTAAAACATTATACGAAGCAAAATTTGCCTGATGTTCGAGGTCCCATAACCATTGTATCAGGAAAGCAGAGGCGCCTGCAGTTTGTAGAATGCCCAAATGATATCAATGGCATGATAGATGCCGCAAAATTTGCAGATCTAGCATTGCTTCTCATAGATGGTAGTTATGGTTTTGAAGTGGAAACCTTTGAATTCCTTAATATTTTACAAGTTCATGGGTTCCCCAAGGTCATGGGTGTTCTGACCCATCTTGATAAATTCAAGGATGCTAAAAAGTTGAAGAAAACAAAGCAACGCCTTAAACACCGTTTCTGGACTGAAATATATGACGGAGCTAAATTGTTTTATTTATCTGGTCTTATTCATGGGAAGTATCTTAAGCGCGAAGTGCACAATCTTGCCCGCTTTATCTCTGTTATGAAGTTTCATCCTCTATCTTGGCGAACTTCCCACCCTTATGTTTTGGTGGATAGGCTTGAAGATATTACTTCTCCTGAAAGAGTTGAAGAAAACAAGAAATGTGACAGAAAAGTCACACTTTATGGTTATTTAAGAGGGTGTAATTTAAAAAGGATAAATAAGGTGCACATAGCAGGAGTGGGTGATCATAGTTTAGCTGCTATTGCTCTGTTACCTGATCCTTGTCCTCTACCATCTGCTGCGAAGAAGAAGGGACTGCGGGATAAGGAAAAGTTATTCTATGCTCCCATGTCTGGCCTTGGGGATCTTCTATATGACAAAGATGCTGTGTACATAAATATCAATGATCACTTTGTCCAGTTTTCAAAAGTTGATGATGAAAACTCATCCATGGCAGGCAAAGGGAAGGGCAGAGATGTAGGGGAGGCTTTGGTGAGATCACTTCAGAATACCAAATACTCAATCAATGAAAAACTAGAGAACAGCACTATCAATCTTTTTAGCCAAAAGTCAAATGTGTCATCAGAAGCACTACACAATGCACAAAGTAGAAATGTGGAAAACAATGAAATGGATATGGATGGTTCAGAATCTGATCAAGATGAAGCCGTTCCACCCAATGCCATAACCGACGGTGAAACTAATGGCTCTGAAGAAGATAGTGACACGAGAGATGATACAGTTGCAATTGGAGATCACTTAAAAGAATGTGTTGAGTTTCATGGTGGAAGACTTAGGAGAAGAGCAGTGTTTGGAAATGATGCTGATCAAAATGATTTGAAGGGTTCAAATGAAGAGGATGGGGCTGTCAGTGATGATGCAGCATCATCTGACTCAGAATTTTCAGAAGAGAGCGATGATGATGGTGGTGGCGATGATGATGATGATGAAGACAACGTGGGAGATGTTTCAAAGTGGAAGGAATTGTTGGCTGAAAGAACTATCTTACGGCATACTCCTAGCTTGATGCAAATTGTGTATGGGAAGTCTACTGTTAATTCAACCACTGTGAAGAAAGAGGATGGCAGTAGTGAGGACGAAGAAAGTGAAGATGAATTTTTTAAGCCTAAAGAGGAAGTTAGAAAGCAAAAAATGAGAGGGGGATTAGATGGTGAAAATGTCAACACTGAGGACTGTTCCAAGACTGCTAAGTTTGTGGATGTTAAACGCTGGGAAGACAAAGATTTTGAGCAAATTCGTGATCGTTTTGTCACTGGTGACTGGTCAAAGGCTGCACTGAGAAACCAAGTTTCTGAGGCTACTACTGGAGATAAATTTGATGCTGTCTATGGTGACTTTGAAGATTTAGAAGCTGGAGAGAAGTATGAGAGTCATCAGATAGATAGTGAAGTTGCTAAGATGGCACAGAAGGGTGAGGACTTGGAAGCTGAAGAGCGGAGGCTCAAGAAACTTGCTCTCCGTGCAAAATTTGATGCTCAATATCCTTTCCCCCCCTTTGTTTACGTTTTCATAGCAAGAGTTATTATCTTAGCTCCCTCAAAAAACTCTGCATCATCTGATGAAGAAGCAGGTAATATAAAAGGGGCCAAGCTCCATCGCGGTCAAACTAATGAAAGTAGCTATTTTGATAAGCTGAAGGAGGAAATTGAACTTCGGAAACAGATGAATATAGCTGAACTCAATGATCTTGATGAGGCTACCCGATTAGAGATTGAAGGCTTTCAAACAGGAAGTTACCTAAGGTTGGAGGTTCATGATGTCCCTTATGAGATGGTTGAATACTTTGATCCTTACCACCCAATATTAGTGGGAGGGATTGGTCTTGCGGAGGAAAATGTTGGATACATGCAGGCTAGGTTCAAGCGGCATAGATGGCACAAGAAAGTTCTCAAGACTAGAGATCCTATAATTGTTTCTGTTGGATGGAGGCGTTATCAGACAACCCCGGTTTATGCTATTGAAGATCATAATGGGAGGCATCGCATGCTTAAATACACCCCAGAACATATGCATTGCTTGGCTATGTTTTGGGGCCCTCTTGCCCCTCCCAACACTGGGATAGTTGCTGTCCAGAATTTATCGAACAATCAGGTCAAATTTGGTACCCTTATTGAGTCTTTGGATTTTGCATTTGACTTTCATTGGAATTCACTTTTATCTGATGATATCAACAGAATATACCTGAATTTCTTCATTTTCGTTTGCTTTTCTACCATAGAGATGATTACAGCAACCGCTGTTGTACTTGAGTTTAATCATGCAGCAGGGATAGTGAAGAAAATAAAGTTGGTTGGTCACCCTTGTAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTCACTTCAGATCTTGAAGTAGCCCGGTTTGAAGGTGCAGCTATTCGAACAGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGATATCCTTAAGCAGTCGAAGAATGGAGGTCTTCCCAAAGAAGGAATTGCGCGTTGCACTTTTGAGGACAAAATTTTGATGAGTGACATTGTTTTCTTGCGTGCATGGACTCAAGTTGAAGTTCCTCAGTTTTTTAATCCCTTAACAACAGCATTGCAGCCTCGTCAGCAGACCTGGCAAGGAATGAAAACAGTTGCTGAATTGAGAAAGGATTACAACCTCCCTGTACCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAATGCCACGGAAGTTCAATCCATTGGTGATTCCCAAGTCTCTACAGGAAGCACTTCCTTTTGCGTCAAAGCCTAAAGATACACCTAGTCGAAAGTGGCGGTCATTCGCTGAGAGAAGGGCTGTTGTTAGGGATACTCATGAGCGTAAAGTTCATGCTCTTGTGCAGCAGCTCCAATTAATTAGAAATGAGAAGTTGAAAAAGCGAAAGCTTAAGGAGGAGGAGAAGAGGAAAGAACATGAAGCTGAGAGAGCAAAGGATGAGCAGCTGCTAAGAAAACGCCAAAGAGAGGAAAGGCGAGAGAGATATCGTGAGCAAGAAAAATTGAAGAAAATCCGGAGAGCAGAGGTCTGA | 3741 | 0.4175 | MAVNDADQAHKLHRSRQSGAKKAKSDKKKKKQEVDDDNHKQNPKAFAFASSAKAKRLQSRAVEKEQRRLHVPIIDRSYGEPAPYVVVVQGPPKVGKSLLIKSLVKHYTKQNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEVETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYLKREVHNLARFISVMKFHPLSWRTSHPYVLVDRLEDITSPERVEENKKCDRKVTLYGYLRGCNLKRINKVHIAGVGDHSLAAIALLPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHFVQFSKVDDENSSMAGKGKGRDVGEALVRSLQNTKYSINEKLENSTINLFSQKSNVSSEALHNAQSRNVENNEMDMDGSESDQDEAVPPNAITDGETNGSEEDSDTRDDTVAIGDHLKECVEFHGGRLRRRAVFGNDADQNDLKGSNEEDGAVSDDAASSDSEFSEESDDDGGGDDDDDEDNVGDVSKWKELLAERTILRHTPSLMQIVYGKSTVNSTTVKKEDGSSEDEESEDEFFKPKEEVRKQKMRGGLDGENVNTEDCSKTAKFVDVKRWEDKDFEQIRDRFVTGDWSKAALRNQVSEATTGDKFDAVYGDFEDLEAGEKYESHQIDSEVAKMAQKGEDLEAEERRLKKLALRAKFDAQYPFPPFVYVFIARVIILAPSKNSASSDEEAGNIKGAKLHRGQTNESSYFDKLKEEIELRKQMNIAELNDLDEATRLEIEGFQTGSYLRLEVHDVPYEMVEYFDPYHPILVGGIGLAEENVGYMQARFKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDHNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQNLSNNQVKFGTLIESLDFAFDFHWNSLLSDDINRIYLNFFIFVCFSTIEMITATAVVLEFNHAAGIVKKIKLVGHPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEDILKQSKNGGLPKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFFNPLTTALQPRQQTWQGMKTVAELRKDYNLPVPVNKDSLYKKIERMPRKFNPLVIPKSLQEALPFASKPKDTPSRKWRSFAERRAVVRDTHERKVHALVQQLQLIRNEKLKKRKLKEEEKRKEHEAERAKDEQLLRKRQREERRERYREQEKLKKIRRAEV | 1246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco08g0031 | 1246 | SMART | DUF663_2 | 693 | 1080 | IPR007034 | - | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 418 | 468 | - | - | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
| Acco08g0031 | 1246 | FunFam | BMS1 ribosome biogenesis factor | 84 | 246 | - | - | |
| Acco08g0031 | 1246 | ProSiteProfiles | Bms1-type guanine nucleotide-binding (G) domain profile. | 82 | 246 | IPR030387 | - | |
| Acco08g0031 | 1246 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 82 | 219 | IPR027417 | - | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 1195 | 1246 | - | - | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 514 | 542 | - | - | |
| Acco08g0031 | 1246 | Coils | Coil | 697 | 717 | - | - | |
| Acco08g0031 | 1246 | CDD | BMS1 | 56 | 275 | IPR037875 | GO:0005525 | |
| Acco08g0031 | 1246 | Pfam | 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal | 765 | 1081 | IPR007034 | - | |
| Acco08g0031 | 1246 | Gene3D | - | 84 | 246 | IPR027417 | - | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 497 | 547 | - | - | |
| Acco08g0031 | 1246 | Coils | Coil | 1173 | 1235 | - | - | |
| Acco08g0031 | 1246 | PANTHER | RIBOSOME BIOGENESIS PROTEIN | 6 | 1229 | IPR039761 | GO:0042254 | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 497 | 511 | - | - | |
| Acco08g0031 | 1246 | SMART | aarp2cn2 | 232 | 318 | IPR012948 | GO:0005634|GO:0042254 | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 597 | 611 | - | - | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 418 | 432 | - | - | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 28 | 42 | - | - | |
| Acco08g0031 | 1246 | Pfam | AARP2CN (NUC121) domain | 232 | 317 | IPR012948 | GO:0005634|GO:0042254 | |
| Acco08g0031 | 1246 | MobiDBLite | consensus disorder prediction | 577 | 618 | - | - |