Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0030 ATGAATAACAATGACCGCATCCACAGCAGGCAGGAAGAAGATCAAAGCAACGCAGATAGTACCGTCGCAAGTCATGACTCCAGATTCAACCAGACCCTCAGAAATGTTCAAGGCTTGCTGAAAGGTCGTAGCATCCCTGGTAAAATATTATTGACTCGAAGACTTGACCCGCTGGATAACTCAAACTCAAAGGAATATTCACCAAGATACGAAAGGAGCTCCTCCTTCAATGATGCTGGCACAAGTGATCACCCGACTAAGGCTAAAGAGGAAGAAGTCCAGAGTACAAGTAAACCAGCTAGTGCTGCCAATGTGAATAAGTTAAAAAAATCAAGTTCTGACAGGGGCAACCCATCTGAAGAAGTCCAGAAATCTTTCATGGGTGCAAGAGCTACTGACTCTGCGAGAGTTATGAAGTTCACTAAGGTTCTTTCTGGGTCGACGGTAATATTAGAGAAGTTGCGTGAATTATCTTGGAGTGGAGTTCCAGATTACATGCGCCCTACAGTGTGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGTGTTCTGAGAAGGAAGCGCCTGGAGTATCTTGACTGTGTTTCTCAGTATTATGATATTCCTGATACACAGCGTTCAGATGATGAGATTAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTTCATTCTTCCAGCAACCACAAGTTCAGAAATCATTGGAGCGCATTCTTTATACATGGGCCATTCGGCATCCTGCAAGTGGATATGTTCAGGGAATTAATGATCTTGTTACACCGTTTCTAGTCGTTTTCCTATCAGAATGCTTAGAAGGCAGTATAGACAATTGGTCAATGTCTGATTTATCCTCAGATAAAATTTCTAATGTGGAGGCTGACTGTTATTGGTGCTTGTCAAAGTTACTTGATGGTATGCAAGACCATTACACATTCGCTCAACCTGGAATTCAGAGGCTTGTTTTTAAGTTGAAGGAATTGGTCAGAAGAATAGATGAGCCTGTTTCTAGACATGTGGAGGAACAAGGACTGGAATTTCTTCAATTTGCTTTTCGCTGGTTCAACTGTCTTCTTATCCGTGAGATACCCTTCCATCTCATCACTCGCCTTTGGGACACATATCTTGCTGAAGGAGATGCTTTACCAGATTTCCTTGTGTACATATTTGCCAGTTTTCTTCTGACGTGGTCAGATAATCTCCAGAAGCTTGATTTTCAAGAGCTGGTAATGTTCCTTCAACACCTTCCAACTCAAAACTGGTCTCACCAAGAGCTTGAGATGGTGCTCTCTCGCGCCTTCATGTGGCACAGCATGTTCAACAACTCTCCCAGCCATTTAGCTAGCTAA 1377 0.4321 MNNNDRIHSRQEEDQSNADSTVASHDSRFNQTLRNVQGLLKGRSIPGKILLTRRLDPLDNSNSKEYSPRYERSSSFNDAGTSDHPTKAKEEEVQSTSKPASAANVNKLKKSSSDRGNPSEEVQKSFMGARATDSARVMKFTKVLSGSTVILEKLRELSWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTQRSDDEINMLRQIAVDCPRTVPDVSFFQQPQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSECLEGSIDNWSMSDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHVEEQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDNLQKLDFQELVMFLQHLPTQNWSHQELEMVLSRAFMWHSMFNNSPSHLAS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0030 458 SMART tbc_4 158 414 IPR000195 -
Acco08g0030 458 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 324 446 IPR035969 -
Acco08g0030 458 MobiDBLite consensus disorder prediction 1 15 - -
Acco08g0030 458 MobiDBLite consensus disorder prediction 61 82 - -
Acco08g0030 458 FunFam TBC domain containing protein 323 458 - -
Acco08g0030 458 MobiDBLite consensus disorder prediction 1 29 - -
Acco08g0030 458 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 98 431 - -
Acco08g0030 458 Gene3D - 138 189 - -
Acco08g0030 458 MobiDBLite consensus disorder prediction 95 112 - -
Acco08g0030 458 MobiDBLite consensus disorder prediction 56 127 - -
Acco08g0030 458 ProSiteProfiles TBC/rab GAP domain profile. 161 388 IPR000195 -
Acco08g0030 458 Gene3D - 323 458 - -
Acco08g0030 458 FunFam TBC domain containing protein 191 322 - -
Acco08g0030 458 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 197 322 - -
Acco08g0030 458 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 140 348 IPR035969 -
Acco08g0030 458 FunFam TBC1 domain family member 135 187 - -
Acco08g0030 458 Pfam Rab-GTPase-TBC domain 165 406 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0030 Acco-ChrAcco08 327274 332528 Proximal