Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0022 ATGACGGCCAGCTCCTTCTGCAATGCTGACTCTGTGTTCTCGAGAGAAGAAGGCGTAGATATTAGAAAGATGATGGAACCAAAGAGGAGCCTCTGCTCTGTGGATCAAAGCAATTATTCCTCGATGGCGTCTAAAAGACACAAGGCTGATTTATCCATCTCCACAAAGGAGAGAAAGGAGAAGATTGGGGAACGAATTGTTGCCTTGCAGCAGCTCGTTTCTCCATTTGGCAAGTCAGATACAGCATCGGTCCTTTTAGAGGCAACTCACTATATAAGGTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAATGCTCTCCAGCAACCAAAACGCAGGATATAGAGGAGTGGAGCCTGAGGAGTAGAGGATTATGTCTGGTTCCTGTGTCGTATACGATTGGAGTAGCTCAGAGCAATGGTGCAGACATATGGGCCCCCACCAAAAGCACATCGTCACAATTTGACTAG 480 0.4625 MTASSFCNADSVFSREEGVDIRKMMEPKRSLCSVDQSNYSSMASKRHKADLSISTKERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLHKQVKVLSAPYLQCSPATKTQDIEEWSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSTSSQFD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0022 159 SMART finulus 52 101 IPR011598 GO:0046983
Acco08g0022 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Acco08g0022 159 FunFam Transcription factor bHLH113 family 45 121 - -
Acco08g0022 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 110 IPR036638 GO:0046983
Acco08g0022 159 Gene3D - 42 116 IPR036638 GO:0046983
Acco08g0022 159 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 136 - -
Acco08g0022 159 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0022 Acco-ChrAcco08 270892 274551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0022 24 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 62.687 2.03e-57 174