Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0016 ATGCATAAAGGCGACAGTGCGACGCCGGCTGAACAATTCCGCTTCCCAACACCACCAGACGTTTTCCCTCTCCCTTCCTCCTCCTCCTTCCAACGCTTACACCCCTTCCCCCAAGGAAGTAACAGTAATGCCACTGACATGGGAAAGAAGGGAAGTTGGTTTTCCGCAATCAAGAGGGTTTTCAGTCACCACTCCAAGGAAAAGGTAGTCAATGATTCTGAAAATAAAAACACAAAAGAAAAGAAGAAGAAAGGTCTCGGAAAACTAAGGCATGGAGAGACAAATTCGTTCATTCCCCTCTTCAGGGAGCCAAGCAGCATTGAAAAAATCTTTGGGGACTTCGAAAGAGAGCAACAATTACTAACTTTCAGGCCTCACACGCCTCCTGAGCTACCCAAAACTCCACCTTTTGTGCCTCCCAGGGCTCCTTCACCAAAGACTGCTTCTCCAAGTGCTCCCTCTCCAAGGGTTGCTTCTCCGAGAGCAGCATCTCCTAGGAGGATTGTTCATTACCACAGACCAGAACCAACGCTAAGGAACCACCATGCCTCAGCAACTAAGATCCAGGCTGCGTATAGAGGTTATATGGCTAGGAGGAGTTTTAGAGCTCTGAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAAAATGTGAAGAGGCAGACGATGAATGCCATGAAATACATGCAGTTGCTGGTGCGGGTTCAATCTCAGATTCAATCCAGGAGGATCCAGATGTTGGAGAACCAGGCACGATATCAAGCTGAATACAAGAATGATAAAGAAGTGGCAAGTACCTTGGGCAAGTTGAGTTTAGGCCATGGAGAGGCGGGTAATCATGAAGATTGGGATGACAGCCTACTTGCAAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATCATCAAGAGAGAGAGAGCAATGGCATATGCATATTCCCATCAGTTGTGGAAAGCCACTCCTACATCAACCCATACACCTGGGTCTGGGGGGTTTCCATGGTGGTGGAACTGGTTGGAAAGGCAGCTGCCCTCAGCAAATCCACAAGGAGGTCAAGTCGTGAAGAATTTTCAACTTACACCTCCCAGACCATATTCTGAACAGAAGACTAATCCACAACCTGCCTCAAACACCCATAAGCAGCACCGCTGTGGGTTTGATAATATGGATGCAGCCACACCAAAATCCACTAAATCAGCTGTAGTGACATCCGCAAAAGCAGTAAGAACCCCGCAAGCAAACAGCTCGAGCTTGCCAAAGTATTCAAGATCAAGGGTAGGGGGAACTGAATCACCTTTTGATGTGCCACTCAAGGATGATGATAGCCTCACAAGCTGTCCGCCATTTTCAGTACCGAACTACATGACTCCAACCCTATCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATGTAAGAGAGAGTTTTCCTGGGACTCCAAACTCTGAATCAAAGAGGCGACTTTCATTTCCTCTTACGCAAGGAATTGGATCCTTTAAATGGACAAAAGGGAACTTGTTCTCAAGCAAGGATCATAGGTCCCAAAGGATGTTAGATAAGAACCAGTCACTTCAATCTTTAGGAAACTTGAGTGTGGATTCAACGGTGTCTTTACCCGCAGGGGTTGGAAGGAAACCGTTTAACAGATTTGTGTGA 1665 0.4709 MHKGDSATPAEQFRFPTPPDVFPLPSSSSFQRLHPFPQGSNSNATDMGKKGSWFSAIKRVFSHHSKEKVVNDSENKNTKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLTFRPHTPPELPKTPPFVPPRAPSPKTASPSAPSPRVASPRAASPRRIVHYHRPEPTLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDKEVASTLGKLSLGHGEAGNHEDWDDSLLAKEEIEARLQRKVEAIIKRERAMAYAYSHQLWKATPTSTHTPGSGGFPWWWNWLERQLPSANPQGGQVVKNFQLTPPRPYSEQKTNPQPASNTHKQHRCGFDNMDAATPKSTKSAVVTSAKAVRTPQANSSSLPKYSRSRVGGTESPFDVPLKDDDSLTSCPPFSVPNYMTPTLSAKAKVRASSNVRESFPGTPNSESKRRLSFPLTQGIGSFKWTKGNLFSSKDHRSQRMLDKNQSLQSLGNLSVDSTVSLPAGVGRKPFNRFV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0016 554 MobiDBLite consensus disorder prediction 65 91 - -
Acco08g0016 554 Gene3D - 179 235 - -
Acco08g0016 554 MobiDBLite consensus disorder prediction 65 81 - -
Acco08g0016 554 MobiDBLite consensus disorder prediction 1 49 - -
Acco08g0016 554 Pfam Protein of unknown function (DUF4005) 414 500 IPR025064 -
Acco08g0016 554 MobiDBLite consensus disorder prediction 351 443 - -
Acco08g0016 554 Pfam IQ calmodulin-binding motif 182 202 IPR000048 GO:0005515
Acco08g0016 554 MobiDBLite consensus disorder prediction 24 49 - -
Acco08g0016 554 MobiDBLite consensus disorder prediction 123 166 - -
Acco08g0016 554 ProSiteProfiles IQ motif profile. 181 209 IPR000048 GO:0005515
Acco08g0016 554 MobiDBLite consensus disorder prediction 351 386 - -
Acco08g0016 554 SMART iq_5 180 202 IPR000048 GO:0005515
Acco08g0016 554 MobiDBLite consensus disorder prediction 128 150 - -
Acco08g0016 554 MobiDBLite consensus disorder prediction 396 428 - -
Acco08g0016 554 PANTHER IQ-DOMAIN 5-RELATED 47 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0016 Acco-ChrAcco08 236035 242744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0016 47 553 IQD Protein Family AT3G59690 51.724 1.33e-159 463