Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2190 ATGTGCCGTGCAGACTTGACGAGAGTCACGAGACCAACTGGTCGCGTTCATCTTCTTCCTAAGATGTCTGCAAATTCTGAGGGATCTTCATCCACATTAAATCGGTCTAATTCTCAGGTTTTTGAGGACACTGCCCTGCTAGTTGACCATTCTGCCCGGACTGCAGTATGTGCTCTCTGCCAAAGGGCTCTGTCACCTGATATTGAGATAACGAATGATCTTGTTCCCTTTGGTGTATGTGGTGATTGTAAATTTTTATTACTTGAAGATATTGGGACCCATTCTCAAAGCTCTCAAAGAATGTTTAGAGGAAGAGCCAGGTACAGCAGTTTTGAATCAATTGAGAATGTTCTATCACATCAGCTACCCAGTAGGGATAATTCTGTGAGACAGAATCAATCCTTTACATCTGTGGAGGATGATCAACTTGGTGATGGTGATACCCCCTCTTGGTTGCTGCAGTATGCTAGTACTCATACTACCCCTAGCGATTCTCAAAGATGGAGGCGGGTTTTCTCTGATACTGATAGTGATGGTTTTGATAATTGGAGTTCTCATTATGGTGAGAATGAATCAAATGCTAGTATTAGGTGCTACAGGGTCACCAATGGTGAGACTGATTCCTTCTCTTTCAGTGCTTATGGTGGTGACTCTGAAGCATCTATGGATAGATATAGTTTTGTAGGCACAGGAATATTAAATGTACCAGATGAGGGCGATGAGTTTGATAGTGACACTGATATAGATCCAATGCATGCTGGCCTTAGCCATTGGAATTCTGATGATATGGAAGGGGAGGGTGAGGAGGAAGAAGAGGAAGAGGAGGAAGAAGAGGAAGAGGAAAGAGAATGGGAAGTGGCTGAGGCTGAGGAAGCTGAAGCCCCTGCTCGCCTTCAAATATTTTTTACTTCAAGTCCCAGTGAGAGAAGTGACCCCATTAATTGGGGTCCACAGTTTCATTTTCCTGAATCCGAGGAAATATTAAGTAGGAGAGTTGGGGATAGATGGCAAACTTACACTGATCAAAGCTCCAATTACCTGGAGGAGGCACATTCACCTCCTTATGGTGCAAATTTTGGGGCTAATCTTGATGCTAGACAATTTGAAGATCTGCTTGTGCATCTTGCTGAGAATGACAACTCAAGACGAGGAGCGCCTCCTGCGGCAGTGTCTTTTGTAAATAGTCTGCCCCGTGTTGTTATAAAGAAAGAACATGAGAAGCATGATGAACTTGTATGTGCCATTTGCAAGGATGTCTTGGCCACAGGCACTGAAGTAAATCAACTTCCCTGCTCTCACCTTTATCATACCTGCTGCATTTTGCCATGGCTGAGTGCACGAAATTCATGCCCCCTTTGTCGTTATGAGCTCCCAACAGATGATAAGGATTATGAGGAAGGGAAGCGCAATATTGACATTAGAAATGACATCCATGAGGTGCAGCAGCTAGATGTGATGGATGGCAATTCTTCTGATAGATCTGAAGCAAATGAAGAGGGTGGTACTAATCAAGGTGGAGGACAGCAACGTGAGCTTGTGAATATGTTTCCTGTAGATAATCCTTCTGCAGTGAGTGGCAGTAGAGGAAGATGGTTTTTCTTTGCTGCTGCCCCAATTGTTAGCCTAGTGGGTATTGTTATTGTCTTATGGTTAGGCAACCCTCTAATTGAGCGTAGTAGACAACTGGGCTGCCACAACTTACGGGGGCCAAATCAGCATCAGGTTCGTGTTTCCGCGTCACCCAACCACAGGGAGGATAGAAGCAGAAGATGGTGGTGTTTTTTCTAA 1788 0.4441 MCRADLTRVTRPTGRVHLLPKMSANSEGSSSTLNRSNSQVFEDTALLVDHSARTAVCALCQRALSPDIEITNDLVPFGVCGDCKFLLLEDIGTHSQSSQRMFRGRARYSSFESIENVLSHQLPSRDNSVRQNQSFTSVEDDQLGDGDTPSWLLQYASTHTTPSDSQRWRRVFSDTDSDGFDNWSSHYGENESNASIRCYRVTNGETDSFSFSAYGGDSEASMDRYSFVGTGILNVPDEGDEFDSDTDIDPMHAGLSHWNSDDMEGEGEEEEEEEEEEEEEEREWEVAEAEEAEAPARLQIFFTSSPSERSDPINWGPQFHFPESEEILSRRVGDRWQTYTDQSSNYLEEAHSPPYGANFGANLDARQFEDLLVHLAENDNSRRGAPPAAVSFVNSLPRVVIKKEHEKHDELVCAICKDVLATGTEVNQLPCSHLYHTCCILPWLSARNSCPLCRYELPTDDKDYEEGKRNIDIRNDIHEVQQLDVMDGNSSDRSEANEEGGTNQGGGQQRELVNMFPVDNPSAVSGSRGRWFFFAAAPIVSLVGIVIVLWLGNPLIERSRQLGCHNLRGPNQHQVRVSASPNHREDRSRRWWCFF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2190 595 MobiDBLite consensus disorder prediction 484 509 - -
Acco07g2190 595 FunFam E3 ubiquitin-protein ligase RING1-like 374 460 - -
Acco07g2190 595 SMART ring_2 413 453 IPR001841 -
Acco07g2190 595 MobiDBLite consensus disorder prediction 237 297 - -
Acco07g2190 595 SUPERFAMILY RING/U-box 393 461 - -
Acco07g2190 595 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 373 460 IPR013083 -
Acco07g2190 595 MobiDBLite consensus disorder prediction 482 509 - -
Acco07g2190 595 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 288 458 - -
Acco07g2190 595 ProSiteProfiles Zinc finger RING-type profile. 413 454 IPR001841 -
Acco07g2190 595 Pfam Ring finger domain 413 454 IPR001841 -
Acco07g2190 595 Coils Coil 260 292 - -
Acco07g2190 595 MobiDBLite consensus disorder prediction 263 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2190 Acco-ChrAcco07 39597752 39600590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2190 50 595 C3H Transcription Factor Family AT5G01980 40.860 1.46e-113 346