LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g2176	ATGGAGTTACAATCCTACTTAGTTAGGATACCTACTTTTCTACTCCTGATTTTCTCTATGCATGCTTTGGCTGATCTTAATTCAGAAAAGCAAGCCCTCCTTGACTTTGCTGCTGCAGTTCATCACGGCCAAAAAATTAACTGGAATTCTGATACCTCAGTCTGCACTTCTTGGGTGGGAATCACTTGCAGCCCGAATGGCTCTCATGTGCTTGCTCTGCGGCTTCCCGCTGTCGGGCTGCGTGGCTCTCTCCTTGCCAATACGATTAGTAAGCTACATGGTCTCATGATTCTCAGTCTTCGGTCTAACAGCCTGAGCGGAAGTCTTCCAAATGACATACTTTCCCATCCTTCCCTTCGCTTTATATATCTTCAACATAACAACTTTTCAGGTGATATCCCTCACTCTTTGTCTCAGCAGCTTCACTTTCTTGATCTGGCCTACAACTCTTTCACAGGAACAATTCCAGCCTTGATTCAGAACTTGCCATATCTAACTGGATTAAAACTCCAGAATAACTCTCTCAGCGGACCAATCCCGGATTTAAACCTCTCAAAGCTTAAGACTTTGAATTTGAGCTACAACAACTTAAATGGTTCAATTCCTTCAGCCCTCAAGAAATTTCCTGCCTCCTCATTTCGAGGGAATCTCAAGTTATGTGGGCCACCTGTACACCAATGTTCTTCAGCTTCCCCATCTTTCGTGCTGTCTCCACCAAAGGTCTCATCAAATCCAAGTGATCTCTCCAGCAGGAAGCTAAATACAGGTGCTATAATTGCAATTGCCTTCATTGGTTTTACTCTGCTGCTTCTTCCGCTTATGATGATAGTGTTGTACTGTCTCAAGAAAAGAGATGGCGGACAAAATGCAGCACTTAAAGAGAAGGATGACAAGCTTAAGGAGGACTTTGGGAGTGGAGTGCAAGAACCAGAGAAAAACAAGCTAATATGTTTTGAAGGTTTTTGTTATAGTTTTGATCTTGAGGACCTATTAAGAGCTTCTGCTGAAGTACTTGGGAAGGGAAGCTGCGGGACGACTTACAAAGCCATCTTGGAGGAGGGTACGGTGGTGGTTGTGAAGAGGTTAAAAGAAGTAGGGGTAGGGAAAAAAGAATTTGAACAACAAATGGAGACTGTTCAAAGGCTAGGTCATCACCGAAATTTTATTCCTCTTCGTGCTTACTACTACTCCAAGGACGAAAAACTGCTGGTTTATGATTACATAGCACTTGGAAGCCTTTCCAGGCTATTGCATGGGACCAAGGGAGCTGAACGAACTCCATTAGACTGGGAATCCAGACTGAAAATCTCACTTGGAGCTGCTAGAGGGATTGCACATATCCACACAACAAGCGGACGGAAATTTGTTCATGGAAATATAAAATCAGCTAATGTGCTTGTCACAGTAGATGTGGAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAATCAGTTTGTCAGTCCCATCTAGAAGTCCAGGGTACCAAGCACCAGAGGCTATTGAAACCCGAAAATGCTCCCAGAATTGTGATGTATATAGCTTTGGCGTTGTCCTTCTTGAGATGCTGACAGGCAAAACGCCAGTTCAGTATTCAGGGCATGATGAAGTGGAGGATCTTCCAAAGTGGGTTCAGTCTGTTGTTAGGGAGGAATGGACTGCTGAAGTATTTGATGTAGAGCTGATGAGGTATCCAAATATTGAAGAAGAACTTGTGCAGATGCTGCAGTTAGCAATGGCATGTGTGGCAAGGGAGCCTGACACGAGACCTTCCATGGAGGAAGTCGTTAAAATAATTGAAGACATTAGAGCATCCAATTCCAAGTGCCCAAATGAATGA	1839	0.4377	MELQSYLVRIPTFLLLIFSMHALADLNSEKQALLDFAAAVHHGQKINWNSDTSVCTSWVGITCSPNGSHVLALRLPAVGLRGSLLANTISKLHGLMILSLRSNSLSGSLPNDILSHPSLRFIYLQHNNFSGDIPHSLSQQLHFLDLAYNSFTGTIPALIQNLPYLTGLKLQNNSLSGPIPDLNLSKLKTLNLSYNNLNGSIPSALKKFPASSFRGNLKLCGPPVHQCSSASPSFVLSPPKVSSNPSDLSSRKLNTGAIIAIAFIGFTLLLLPLMMIVLYCLKKRDGGQNAALKEKDDKLKEDFGSGVQEPEKNKLICFEGFCYSFDLEDLLRASAEVLGKGSCGTTYKAILEEGTVVVVKRLKEVGVGKKEFEQQMETVQRLGHHRNFIPLRAYYYSKDEKLLVYDYIALGSLSRLLHGTKGAERTPLDWESRLKISLGAARGIAHIHTTSGRKFVHGNIKSANVLVTVDVEGCISDFGLTPLISLSVPSRSPGYQAPEAIETRKCSQNCDVYSFGVVLLEMLTGKTPVQYSGHDEVEDLPKWVQSVVREEWTAEVFDVELMRYPNIEEELVQMLQLAMACVAREPDTRPSMEEVVKIIEDIRASNSKCPNE	612

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g2176	612	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	408	611	-	-
	Acco07g2176	612	Pfam	Leucine rich repeat N-terminal domain	27	64	IPR013210	-
	Acco07g2176	612	SUPERFAMILY	L domain-like	42	222	-	-
	Acco07g2176	612	SUPERFAMILY	Protein kinase-like (PK-like)	336	599	IPR011009	-
	Acco07g2176	612	Pfam	Leucine Rich Repeat	186	208	IPR001611	GO:0005515
	Acco07g2176	612	CDD	STKc_IRAK	338	602	-	-
	Acco07g2176	612	FunFam	Probable inactive receptor kinase RLK902	26	183	-	-
	Acco07g2176	612	Gene3D	Ribonuclease Inhibitor	183	228	IPR032675	-
	Acco07g2176	612	Gene3D	Transferase(Phosphotransferase) domain 1	409	611	-	-
	Acco07g2176	612	FunFam	pollen receptor-like kinase 1	300	407	-	-
	Acco07g2176	612	PANTHER	OS05G0588300 PROTEIN	13	604	-	-
	Acco07g2176	612	Gene3D	Phosphorylase Kinase; domain 1	300	407	-	-
	Acco07g2176	612	Gene3D	Ribonuclease Inhibitor	25	182	IPR032675	-
	Acco07g2176	612	ProSiteProfiles	Protein kinase domain profile.	332	602	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco07g2176	612	Pfam	Protein kinase domain	335	597	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g2176	Acco-ChrAcco07	39515097	39517620	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco07g2176	13	608	Receptor kinase-like Gene Family	AT5G58300	60.165	0.0	728

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Acco07g2176		Pkinase	4.7e-34	CL0016