Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2170 ATGTGGAGTAGGGTGACGGACGATGATACACGATGTAGGTGGCAAAACCCCATTCGTTGGTTCCCAACACGTAAAGCTGAGGCGCGTGTGGGAGTGTTGGTTTCAAAAGCATGTGGAAATTTCATAGCCAGCTTCCTTCGCCCCCCAGGAGAAGTAAGAAAAGAATCCTCTAATAAAAACACACCTTCTCTTTCGGTCCGCCCTGTCTTTCTGGGTTTCACACACACAGAAATGGAGAATCTTCCTTCGGATCGTAGAAAGGCAATCGAGGAACTGGAGAGGGGCCGTGAGTCTGCCACCCAGCTCCGCCGTCTCGTGCTCAACCCCAGCGGCGAGGGAACGACGCCGTCTGTGCAAGATCTTGCGGACGAGGTGGTGAACTCCTTTTCCAACACCCTTTTGCTCTTGAATCTCCCCTCTCACGATTTCCAGATGCAGCAATATTCTTCTTGTGTTCTTCCCGCTAAATCTGACGACTCTGAGGATAGTTGCAAGAGCACTTCCGCTGTTAGGGAACGAAGAGGCTCTTATAAGAGAAGGAGAACATCACAAACATCGGAGATAGACTCCGGAGCTCCGATTGATGATGGCCATGCGTGGAGAAAGTATGGTCAAAAGAATATAATGAATGCCACATACCCAAGGAACTACTTCAGATGCACTCACAGGTTTGACCAGGGGTGCCAAGCAACCAAACAGGTGCAGAGAATACAAGAGAAGCCTGAGCTGTACAGGACAACTTACTATGGCCAACACACGTGCAACAGAAACTCGCTGAGCAACGAGATCCTTTTGGATGCTAATTCTCCTTCACACCCTTCCCGATTTATCAATTTTGACAAGAACCTCGCCACCGATCAGGCCTTCTTCTCATCACCACCATCTCTTCCCATGACAGGAACACAGTGTAAGGAAGAGATTCCCTCATCTTCATCGGGGGATTACGTTGTCTCCCCTGAATCAGACCACAAGGATCCCATTTCTGATATGTTGTTCGGTGATTTTGTGTTCAACCCTTTGATTATTTAG 1029 0.4869 MWSRVTDDDTRCRWQNPIRWFPTRKAEARVGVLVSKACGNFIASFLRPPGEVRKESSNKNTPSLSVRPVFLGFTHTEMENLPSDRRKAIEELERGRESATQLRRLVLNPSGEGTTPSVQDLADEVVNSFSNTLLLLNLPSHDFQMQQYSSCVLPAKSDDSEDSCKSTSAVRERRGSYKRRRTSQTSEIDSGAPIDDGHAWRKYGQKNIMNATYPRNYFRCTHRFDQGCQATKQVQRIQEKPELYRTTYYGQHTCNRNSLSNEILLDANSPSHPSRFINFDKNLATDQAFFSSPPSLPMTGTQCKEEIPSSSSGDYVVSPESDHKDPISDMLFGDFVFNPLII 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2170 342 ProSiteProfiles WRKY domain profile. 189 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco07g2170 342 SMART WRKY_cls 194 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco07g2170 342 Pfam WRKY DNA -binding domain 195 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco07g2170 342 MobiDBLite consensus disorder prediction 295 317 - -
Acco07g2170 342 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 90 271 IPR044810 GO:0003700
Acco07g2170 342 MobiDBLite consensus disorder prediction 158 185 - -
Acco07g2170 342 Gene3D WRKY domain 179 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco07g2170 342 MobiDBLite consensus disorder prediction 156 190 - -
Acco07g2170 342 MobiDBLite consensus disorder prediction 295 320 - -
Acco07g2170 342 SUPERFAMILY WRKY DNA-binding domain 192 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2170 Acco-ChrAcco07 39471345 39474193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2170 78 274 WRKY Transcription Factor Family AT3G56400 36.449 6.38e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco07g2170 WRKY 2.3e-24 CL0274