Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2165 ATGATGCGCTTCTTGTTGTTTCTTCTCTTTCTTTTTGCTCCAGTCACAGTATTTTCTGACGACCCAACCTTCAACGACGACGTGTTGGGTTTGATTGTCTTCAAAGCTGGTTTGCAAGACCCGAAAAGTAAACTTTCTACTTGGAACGAAGATGACAATAATCCCTGCAAGTGGGCTGGAGTCAAATGTGATCCTACAACCAATCGGGTCTCTGCCATTGTGCTAGACGGCTTTTCTCTTTCTGGGCACATTGATCGAGGGCTCCTGAGATTACAGTCCCTTCAAATTATCTCACTTTCCAAGAACAACTTCTCTGGGTCCATAAACCCAGATCTTCTTCGGCCTGGGAGTTTGCAAGTTTTGGACTTAAGTGAGAACAACCTCTCTGGGTCTATACCAGAAGGGTTCTTCCGCCAATGTGGGTCCTTAAGATCAGTTTCATTTGCGAAAAATAAGCTTACTGGTAAGATTCCTGATTCCTTGAGTTCTTGCACCTTGTTAGTAACTGTTAACTTCTCTTCCAACCAGCTAAATGGGAATTTACCTTCTGGGATATGGTCTTTGAGACAACTGCAGTCACTCGATCTGTCAAATAACTTGCTCGAGGGAGAGATTCCTGAGGGAATTGAGAATTTGTATGATTTGAAGGAGTTCAATTTGCAGAGGAATCGCTTCACTGGAAGGCTTCCTGGTGATATTGGAGGATGCATGTTTTTAAAGTCACTTGATTTGAGTGATAATTTTCTCTTTGGGACAATTCCTGAGTCAATGCAGGGACTCAACTCCTGCACATCCCTCAATTTACACGGGAATTCACTTACTGGAAAAGTTCATGATTGGATTGGAGAATTAAAAAATCTGGAGATGTTGGATCTTTCAGCAAATAGATTTTCCGGTTTGATTCCAAAATCAATAGGCAATCTCAACTCGTTGAATAACTTAAATCTATCAAGGAATCATTTTACTGGAAACTTGCCGGAATCATTGGTAAGCTGTGTTAAGCTTTTGGCTCTAGACATCAGCCAAAATCAGTTAGAAGGGCGTCTTCCCTCGTGGATTTTCAGGATGGGCTTACGAAGTGTTACACTTTCAGGGAACAGCTTCAATAGCAGCAGTTATCCTTTATTTACCTCCACACCTGAATCTTATCATGGTCTTCAGGTTTTGGACTTGTCGTCAAATGCGTTTTCTGGTGAACTTCCTTCTAATATTGGGGGCCTCAGTAGCTTGCAAGTATTAAATATGTCCGCTAACAATCACTCTGGTCCTATTCCAGTGGGAATAGGAGACCTTAAATCTTTAAATATTCTTGATTTGAGTGACAACAAACTTAATGGAAGTATTCCTCCTGAACTAGAGGGGGCTTTTTCACTCAGTGAACTGCGGCTACAGAACAACTTCCTAAGTGGGGAAATTCCAGCCCAAATTGAAAAGTGCTCTTCGCTAACAACTTTGATTCTTTCTCATAACAAGCTAACCAGTTCAATCCCAGCCGCCATTGCAAACTTGACTAATCTTCAGTATGTGGACTTGTCATCGAATGAACTCTCTGGAAGCTTACCCAAAAATCTCTCAAATCTTTCACACCTTTTATTTTTTAATGTCTCTTACAACCACCTTCAAGGGGAGCTACCAGTTGGCGGCTTCTTCAATATCATCTCTCCCTCATCTGTCACTGGCAATCCATCCCTATGTGGTTCTGTTGTCAATCATTCCTGCCCTTCAGTCCATCCGAAACCTATTGTCCTAAACACCAATTCTTCTTACTCCAACTCCAACTCCTCCTCTCAAAACCATGGTCATAAAAAGATCATACTAAGCATTTCTTCTCTTATTGCTATTGGTGCTGCTGCTATTATCACTGTTGGTGTGGTGGCCATTACTGTCCTAAATGCCCATGTTCGTCGTTCAAGGTCTCGTTCTGCTGCCCCATTTGCATTATCTGGTGGTGAGGACTATAGTTGTTCTCCCGCTAATGATCCAAACTATGGCAAGCTTGTTATGTTTTCTGGCGAAGCTGGTTTTGATGATGGGGCAAATAATCTCCTAAACAAAGACAGTATAATAGGTCGTGGTGGGTTTGGAATTGTTTATCACACTGTCCTTCGAGATGGGCATTCTGTTGCAATCAAGAAGCTTACAGTCTCTGGATTGATCAAGTCACAAGAAAACTTCGAGAGGGAAGTGAAAAATCTTGCGACAATCAAACACCAGAATCTTGTGGGACTTAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTATCTATCCAGAGGGAGTCTGCATAAGCTCCTGCATGAAGATGAGCATGGCGGGAACATGCTTTCTTGGCAACAAAGGTTCAAGATTATTCTTGGAATGGCAAAAGGGTTGGCTCATTTGCATCAAAAGAATATAATTCACTACAATCTAAAATCAACAAATATTTTGATTGATTGCTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTGGTGAGGCTTTTGCCAGTGTTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGTTACATGGCCCCTGAGTTTGCATGCCGGACGGTGAAGATAACTGAGAAATGTGACGTGTATGGTTTTGGGATCCTAGTTCTTGAGGTGGTGACTGGGAAAAGACCGGTGGAATACATGGAGGATGATGTGGTTGTTCTGTGTGATATGGTAAGGGGTGCATTGGAGGAAGGCACAGTGGAGCAATGCGTGGACAGGAGGCTTCTGGGCAATTTTGCTGCTGAGGAAGCAATTCCTGTGATTAAATTGGGATTAATTTGTGCATCACAAGTGCCTTCAAACCGCCCAGATATGGCCGAGGCAGTTACTATATTGGAGTTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATGA 2904 0.4236 MMRFLLFLLFLFAPVTVFSDDPTFNDDVLGLIVFKAGLQDPKSKLSTWNEDDNNPCKWAGVKCDPTTNRVSAIVLDGFSLSGHIDRGLLRLQSLQIISLSKNNFSGSINPDLLRPGSLQVLDLSENNLSGSIPEGFFRQCGSLRSVSFAKNKLTGKIPDSLSSCTLLVTVNFSSNQLNGNLPSGIWSLRQLQSLDLSNNLLEGEIPEGIENLYDLKEFNLQRNRFTGRLPGDIGGCMFLKSLDLSDNFLFGTIPESMQGLNSCTSLNLHGNSLTGKVHDWIGELKNLEMLDLSANRFSGLIPKSIGNLNSLNNLNLSRNHFTGNLPESLVSCVKLLALDISQNQLEGRLPSWIFRMGLRSVTLSGNSFNSSSYPLFTSTPESYHGLQVLDLSSNAFSGELPSNIGGLSSLQVLNMSANNHSGPIPVGIGDLKSLNILDLSDNKLNGSIPPELEGAFSLSELRLQNNFLSGEIPAQIEKCSSLTTLILSHNKLTSSIPAAIANLTNLQYVDLSSNELSGSLPKNLSNLSHLLFFNVSYNHLQGELPVGGFFNIISPSSVTGNPSLCGSVVNHSCPSVHPKPIVLNTNSSYSNSNSSSQNHGHKKIILSISSLIAIGAAAIITVGVVAITVLNAHVRRSRSRSAAPFALSGGEDYSCSPANDPNYGKLVMFSGEAGFDDGANNLLNKDSIIGRGGFGIVYHTVLRDGHSVAIKKLTVSGLIKSQENFEREVKNLATIKHQNLVGLKGYYWTSSLQLLIYEYLSRGSLHKLLHEDEHGGNMLSWQQRFKIILGMAKGLAHLHQKNIIHYNLKSTNILIDCSGEPKIGDFGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGTVEQCVDRRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEAVTILELIQCPSEGQEELE 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2165 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 304 577 - -
Acco07g2165 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 24 952 - -
Acco07g2165 967 CDD STKc_IRAK 689 956 - -
Acco07g2165 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 677 759 - -
Acco07g2165 967 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Acco07g2165 967 SMART LRR_typ_2 503 526 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 212 236 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 284 307 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 431 455 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 308 332 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 116 139 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 188 211 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 91 115 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 527 551 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 479 502 IPR003591 -
Acco07g2165 967 SMART LRR_typ_2 383 407 IPR003591 -
Acco07g2165 967 SMART LRR_sd22_2 188 211 - -
Acco07g2165 967 SMART LRR_sd22_2 431 454 - -
Acco07g2165 967 SMART LRR_sd22_2 503 529 - -
Acco07g2165 967 SMART LRR_sd22_2 239 262 - -
Acco07g2165 967 SMART LRR_sd22_2 284 310 - -
Acco07g2165 967 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Acco07g2165 967 SMART serkin_6 683 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2165 967 Pfam Protein kinase domain 685 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2165 967 SUPERFAMILY L domain-like 23 274 - -
Acco07g2165 967 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Acco07g2165 967 Pfam Leucine rich repeat 239 297 IPR001611 GO:0005515
Acco07g2165 967 Pfam Leucine rich repeat 481 540 IPR001611 GO:0005515
Acco07g2165 967 SUPERFAMILY Protein kinase-like (PK-like) 685 957 IPR011009 -
Acco07g2165 967 Pfam Leucine Rich Repeat 190 212 IPR001611 GO:0005515
Acco07g2165 967 ProSiteProfiles Protein kinase domain profile. 683 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2165 967 Gene3D Ribonuclease Inhibitor 183 281 IPR032675 -
Acco07g2165 967 Gene3D Ribonuclease Inhibitor 286 576 IPR032675 -
Acco07g2165 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 760 962 - -
Acco07g2165 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 25 303 - -
Acco07g2165 967 PRINTS Leucine-rich repeat signature 431 444 - -
Acco07g2165 967 PRINTS Leucine-rich repeat signature 118 131 - -
Acco07g2165 967 ProSiteProfiles Leucine-rich repeat profile. 117 139 IPR001611 GO:0005515
Acco07g2165 967 SUPERFAMILY RNI-like 252 551 - -
Acco07g2165 967 Gene3D Phosphorylase Kinase; domain 1 677 759 - -
Acco07g2165 967 Gene3D Transferase(Phosphotransferase) domain 1 760 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2165 Acco-ChrAcco07 39440918 39443929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2165 1 966 Receptor kinase-like Gene Family AT3G56370 61.689 0.0 1135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Acco07g2165 Pkinase 9.7e-42 CL0016