Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2161 ATGGGCGCGTGCGCGTGGCAGACCCACAAGTTCATGCAGGAGTTTAGAAGGAGAAATGAGGTGATGTGGGCCCAGGGTGTTGGAGCGAGAGCTTGTCAGGCGTTGATTTTCCATCCATTTTGCTTCCCGCTGTTGATTCACAAATTTTTGCATGAGCTGCGTCCTCACAGTTTTATACAACAGACAAGCTCTCTTGACGGGATGGGGTGTTTTACAGTCTTAAAGAGTAAGAAGAAGAAGTCCGAGCAGATCAAGAATGTGAAACGGGTCAACCATAAAGAAAATTTACCTGCTGCAGTTCTACCTGAACCTCAAACTCATACGCCTTCACTGCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCACTCAACCCACTAATAACATCACCTACAGTAGAATGCGGGCATTATCTGCTCCATCAACTCTTGATGCAGCTGAACAAGATGCTTTGGCATCTGTTGAGTATGAGGAACAAGATGAGTCAAATTACCGGGCTGGATCATTAAAGGAGCAGCGTTCATCCAGTCCACAACCTCTACCTCTTCCATGTCCTCAATCTGGTGGTTCATTAAGGGCAACGAGTAGCTTTAAGTCGGGCACAGCTAGTGGTCCTCTCTATGCTTCGGGTCCTTTGCCACTGCCACCTACCGGATCACTTAGAAACTTTACATATGAAGAAATTTCTGCTGCTTGCCACAATTTCTCTTCAGATCGGTGCATGTCAGAAGGTCTTTCTTCCACCATATTTAAAGCTTCTTTCGGTGATGAGGCTTCAAGTTCAAAGAGGTTTGAAGCCACTGTCACTCGCCTTCATCCATCTGCTCAGGGCTTAAAGGAATTCGTGAATGAAGTTAATATTATTGCATCCTTGCAAAACCCAAACCTTTGTAAATTGCTTGGTTTTCATGCGTGTGAGGGTTCAGAACAGAGAATGTTGGTCTATGAGAGGCTATATCATGGAAGTTTGGACCGCGTGTTGCATGGTAGATCTGATGGCCCACCTATTGATTGGAATACAAGAATGAAAATTGCTTTATGTGCTGCACAGGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACTGCCAATATACAGATCGACAAAGATTTTAGTGCAAAGCTTTCAGGTTATGGTTGTGTAGGACATATTCCTGAGGAAGAGGTTTCAAGCAATTCAACGGCTGTTGGAAACCTATCTGTAGAGACTCTAGAAAGAGGAATGCTAACTCCAAAGAGCAACGTTTGGAGCTTTGGAGTTGTTCTTCTGGAGTTACTTACCGGAAGAAAGAATCTTGACAGCCGTCACCCCAAAGAAGAGAGGAATTTAGTGAAGTGGAGCCGGCCTTTCCTGGCAGATGATTGTCGACTGTCATTGATCATGGATCCTCAACTTAAAGGCCGGTTTCCTTCCAAAGCGGTAAGGAAAGTATCTGACATTGCACTGAGATGCCTTCAAAATGAACCATCAGAAAGACCCACCATGAGAACTGTGGTTGAGCATCTGAGAAAAATACAGGATATGAAGCAGTCTTGCCGGTTTCCACTGCAAGAGCCTGCAGCAATTTCCAGAAAACAGGTGTCAAGGTCACCAAGCCTCAATGGTATGATCAGTCCTGCGCCTAGAATGAGTTTCTCACCATCCCCGCCGCCTTCAGCAGCCGGAGCATCTATTTCACCTCCAAGATGGTCTGGCGTGCCCCTCTTGCTTCCTCCCCATGCTTGTTCCTCCACCATTTCATTGGAGGAGCTTGATCGCCAAGAATCCCGCAAATCATCTTCCTGTGTCTCCAGGAGGGCTAGTGTGGAAGGATTTTGA 1848 0.4589 MGACAWQTHKFMQEFRRRNEVMWAQGVGARACQALIFHPFCFPLLIHKFLHELRPHSFIQQTSSLDGMGCFTVLKSKKKKSEQIKNVKRVNHKENLPAAVLPEPQTHTPSLQSAPPSFRTRVKPTQPTNNITYSRMRALSAPSTLDAAEQDALASVEYEEQDESNYRAGSLKEQRSSSPQPLPLPCPQSGGSLRATSSFKSGTASGPLYASGPLPLPPTGSLRNFTYEEISAACHNFSSDRCMSEGLSSTIFKASFGDEASSSKRFEATVTRLHPSAQGLKEFVNEVNIIASLQNPNLCKLLGFHACEGSEQRMLVYERLYHGSLDRVLHGRSDGPPIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEVSSNSTAVGNLSVETLERGMLTPKSNVWSFGVVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPSKAVRKVSDIALRCLQNEPSERPTMRTVVEHLRKIQDMKQSCRFPLQEPAAISRKQVSRSPSLNGMISPAPRMSFSPSPPPSAAGASISPPRWSGVPLLLPPHACSSTISLEELDRQESRKSSSCVSRRASVEGF 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2161 615 PANTHER OS01G0588500 PROTEIN-RELATED 165 516 - -
Acco07g2161 615 MobiDBLite consensus disorder prediction 156 198 - -
Acco07g2161 615 SUPERFAMILY Protein kinase-like (PK-like) 215 523 IPR011009 -
Acco07g2161 615 MobiDBLite consensus disorder prediction 530 571 - -
Acco07g2161 615 Gene3D Phosphorylase Kinase; domain 1 218 318 - -
Acco07g2161 615 MobiDBLite consensus disorder prediction 591 615 - -
Acco07g2161 615 MobiDBLite consensus disorder prediction 105 135 - -
Acco07g2161 615 Pfam Protein tyrosine and serine/threonine kinase 242 512 IPR001245 GO:0004672|GO:0006468
Acco07g2161 615 MobiDBLite consensus disorder prediction 533 551 - -
Acco07g2161 615 MobiDBLite consensus disorder prediction 95 135 - -
Acco07g2161 615 ProSiteProfiles Protein kinase domain profile. 237 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2161 615 Gene3D Transferase(Phosphotransferase) domain 1 320 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2161 Acco-ChrAcco07 39420266 39424791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2161 216 516 Receptor kinase-like Gene Family AT4G02010 38.562 1.62e-59 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Acco07g2161 PK_Tyr_Ser-Thr 9.1e-26 CL0016