Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2158 ATGTTTTCTGGGGCAGGGATTTACTGCAAGGGAAACATGCTAATTTTGGGCGACAGGAACAGAGGAGCTAAAGAGAGGGAATGTGAAGAATCGGTCTTGCAGAATTCTGGGGAATTAGAGTCCAAATCGGTTGGGCAGAATGGATCGATAACAACCCAACAGCTAACAATCGATGAGAATCTTCTGGTTGACCCTAAACAACTCTTCATTGGGTCCAAAATCGGGGAAGGAGCTCATGGTAAAGTTTATGAAGGAAGGTATGGAGATCAAATTGTTGCAATTAAGGTTCTGCATCGAGGGAGCACTTCAGAAGAAAGAGCAGCCCTTGAAAATCGTTTTGCTAGGGAGGTTAATATGATGTCCCGTGTCCATCATGAGAATCTAGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTTATTGTGACAGAGCTGTTACCAGGGATGTCACTGAGGAAATATATGACTAGTCTACGCCCTAATATAATAAACTGCCAGGTGGCTATAAACTTTGCCCTCGATGTTGCTCGGGCCATGGATTGCCTACACGCTAATGGGATCATACATAGAGACTTGAAACCTGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTCACTGAAATGATGACTGCTGAAACTGGAACTTACCGTTGGATGGCACCCGAGCTGTACAGTACTGTGACGCTACGTCAAGGAGAGAAGAAGCACTACAACAACAAGGTTGATGTGTACAGCTTTGGAATTGTTTTATGGGAACTTTTAACGAATCGCATGCCTTTTGAAGGGATGTCTAATTTACAAGCTGCTTACGCTGCTGCTTTTAAGAATGAGAGGCCTAGCCTTCCCGAAGATATACCACCTGACCTTGCTTTTGTCATACAATCATGCTGGGTTGAGGATCCAAACATGAGACCGAGCTTCAGTCAGATCATCCGTATGCTTAACGCCTTTCTCTTCACTTTGTCACCTGCACCGCCCTCCCCTATTTTGCAGGAACCTGAAAATGCTGAACCTGAGGCTGCAGCAACTACGAGTAATGGTGCCATCACTGAGTTTTCTGCACGAAACAGAGGGAAGTTTGGATTTCTTCGCCAACTGTTTACTTCCAAAAGGACCAAAAACTAA 1170 0.4427 MFSGAGIYCKGNMLILGDRNRGAKERECEESVLQNSGELESKSVGQNGSITTQQLTIDENLLVDPKQLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYMTSLRPNIINCQVAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKNERPSLPEDIPPDLAFVIQSCWVEDPNMRPSFSQIIRMLNAFLFTLSPAPPSPILQEPENAEPEAAATTSNGAITEFSARNRGKFGFLRQLFTSKRTKN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2158 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Acco07g2158 389 MobiDBLite consensus disorder prediction 353 367 - -
Acco07g2158 389 CDD STKc_MAP3K-like 74 329 - -
Acco07g2158 389 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 331 - -
Acco07g2158 389 Gene3D Phosphorylase Kinase; domain 1 56 147 - -
Acco07g2158 389 FunFam Kinase suppressor of Ras 1 57 147 - -
Acco07g2158 389 ProSitePatterns Protein kinases ATP-binding region signature. 74 95 IPR017441 GO:0005524
Acco07g2158 389 Pfam Protein tyrosine and serine/threonine kinase 70 329 IPR001245 GO:0004672|GO:0006468
Acco07g2158 389 SUPERFAMILY Protein kinase-like (PK-like) 60 348 IPR011009 -
Acco07g2158 389 Gene3D Transferase(Phosphotransferase) domain 1 151 361 - -
Acco07g2158 389 SMART serkin_6 68 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2158 389 PRINTS Tyrosine kinase catalytic domain signature 182 200 IPR001245 GO:0004672|GO:0006468
Acco07g2158 389 PRINTS Tyrosine kinase catalytic domain signature 256 278 IPR001245 GO:0004672|GO:0006468
Acco07g2158 389 PRINTS Tyrosine kinase catalytic domain signature 300 322 IPR001245 GO:0004672|GO:0006468
Acco07g2158 389 PRINTS Tyrosine kinase catalytic domain signature 144 157 IPR001245 GO:0004672|GO:0006468
Acco07g2158 389 ProSiteProfiles Protein kinase domain profile. 68 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2158 389 MobiDBLite consensus disorder prediction 343 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2158 Acco-ChrAcco07 39407043 39411070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2158 56 389 MAP Kinase Kinase Kinase AT5G01850 72.423 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco07g2158 PK_Tyr_Ser-Thr 3.7e-60 CL0016