Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2111 ATGATGGATAGTCACACTCTTCTTCAGCCCTCCAGCTGGTCATTCCCCAACGACTTAACCTCTGTTTTTGATCCCTTCGATCCTTCCTCCACCTTCTTCTTTGAAGATGATCATTTCCAATTCCCCGTTGAAATGATGGGATCAGAAGCATCCAAATCCATAGAGAATTCTTCCTTCAATGAACTTGAAGGTTCTTATGTCTTCTTCTCTCAAGACAATTTCCCGTACCCAGCTAATGAAGAAGATATTCTGGGAATAGATTTGGGTGCTCTTGACCCTGATTTGAGTACCCAGTTTCTGAATAGCCATGGAAGCCCAGAAGAAAGTGAAGAAAGTTTTCATCTTTCCCAGAATCTATCTTCTGAAAAAGAAGATTCTTGGGGTTCTAGTCCACCCATGAAATCATCAGAATATTCCTCTCTTCAACCAACTTCACTGAATTTGCCTCAAGAAGACATGGAAATAGATACCCAAGTGATTCTTCCCCATCTCCTAGAAGCCCATGTTGAAGCAAAAGATCAGAACCAGAATGCTCTTGGAGAAGAAACCTTGAGATGCATAAACCAGAAAACAAGCCCACTTGCAGAGGATCCCATGGAACGCCTCGCATTTCACTGTTCTTATCAAGACATCACTGGAAATCCACAGGGGCATTTCCTCAAACAGGAGGCGTGCAAAAATTTTGATACTGCATTCAAGGTATTTTACCTAAGCATGTCCCATGGAAGATTTGCTCATTTTGTAGCGAATTTGGCAATTCTAGAAGCCATACCAGAGGATTCAGAAGCTGTACACATAATAGACTTTGATTTGGGAGAAGGGGTTCAGTGGGCCCCTGTGATAGAGGCCATTTCTCAACGGAAGAAAGCGCTGAAGTTAACATCAATCAAATGGGAAAGAGAGCAAGAAAACTCTGAGGAACCCAGAAGGAACCTTATTGAATACGCAAGATCATGTGGTCTCAAGATGAAGGTAGAAGAAAAGAGTTTTGAGGAATTAGTTAAAGAGCTCAAGAAATTGAACAAAAGAGGAGGGAGTGTGAAGAGAGATTTCCTAATCTTTAACTGCATGGTGGGTCTTGCTCACATGGGGAGAGGAAGAAGCAGAAGATCAGTCATGGAGTTTCTGGATTTAGGCAAGAACATGATCAACAAGAACACCTGCAACAGGGGGATTATCACTTTCGGGGATGGAGAAGCCGACGAAAAACTGATAAATAGTCTGAATTTCAGGTCATTCTTTGACGGTAACATGATGCATTACAAGGCCTTAATGGAATCAATTGAATCAAATTTCCCCGATTGTTTCTTACAAGCAAGGACAGCAATAGAGTTCTTATTTGTGGGACCCTACGTGTCTTCCAGTGTTTGGACGAAGAAGTGGGAAGATTTGAGAGGAAATTACCAATTTCTGGCGAGGAATGGATTTGGTATAGAAGGAAGAAGATTAAGCGAAGAGATTTTAATGGAAGCGAGGGAAATATTGAGAGGAGGCAGGGAGGGATCGTATGAGGCAAGGATTGAAGGGCAAAATGGGAATGAGATGGTTCTCTTATGGAAAGGGACCCAGTTAGTCAAAGTGTCAACTTGGGGAAGTCAAAAGGCCTGA 1608 0.4229 MMDSHTLLQPSSWSFPNDLTSVFDPFDPSSTFFFEDDHFQFPVEMMGSEASKSIENSSFNELEGSYVFFSQDNFPYPANEEDILGIDLGALDPDLSTQFLNSHGSPEESEESFHLSQNLSSEKEDSWGSSPPMKSSEYSSLQPTSLNLPQEDMEIDTQVILPHLLEAHVEAKDQNQNALGEETLRCINQKTSPLAEDPMERLAFHCSYQDITGNPQGHFLKQEACKNFDTAFKVFYLSMSHGRFAHFVANLAILEAIPEDSEAVHIIDFDLGEGVQWAPVIEAISQRKKALKLTSIKWEREQENSEEPRRNLIEYARSCGLKMKVEEKSFEELVKELKKLNKRGGSVKRDFLIFNCMVGLAHMGRGRSRRSVMEFLDLGKNMINKNTCNRGIITFGDGEADEKLINSLNFRSFFDGNMMHYKALMESIESNFPDCFLQARTAIEFLFVGPYVSSSVWTKKWEDLRGNYQFLARNGFGIEGRRLSEEILMEAREILRGGREGSYEARIEGQNGNEMVLLWKGTQLVKVSTWGSQKA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2111 535 Coils Coil 323 343 - -
Acco07g2111 535 ProSiteProfiles GRAS family profile. 152 531 IPR005202 -
Acco07g2111 535 MobiDBLite consensus disorder prediction 97 144 - -
Acco07g2111 535 Pfam GRAS domain family 163 530 IPR005202 -
Acco07g2111 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 524 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2111 Acco-ChrAcco07 38933652 38935259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2111 143 530 GRAS Transcription Factor Family AT5G66770 24.755 4.24e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco07g2111 GRAS 7.5e-36 CL0063