Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2110 ATGGCTGCATCATCGTTAACACTAGATTTTCTCCTCCATCTAACTCTCCTTTCCCTTCTAGTTTCAGCCAATAAGGCTCAAGAAATGCCACCGTTTTATTATGAAGGATTCGATACAAGTGACCCATTTTCCCTCGAGGTGAATGGCTCGGACCAAGGTGAGTCAGACACAGAAGCGAACGACGTTGGGATCAATGTTAAAGGAACAGAGTCAGATATCTCTAACCGAGCTGCTTACATTGGGAAAGATTCTAGATGGGTTAATTTAAGTATGGAGCAATCTGAAGCCGTGCAAGCTTGGATAGATTATGACGGCGACAAAAAAGTCGTGAACGTCGGTTTCTCTGCATCAACAGGGGATGGTAAAGCAAGCTCTCGTTACATTCTGGGATGGAGTTTTGCTGTCAATGAACCTGCTCGTCCTCTTGACCTTTCCAAGCTTCCAAATCCACCACCAAAAGTGAAAGATCCTTCCTCTTTTCCTTGGGTCAACATTATCATTGGAGTTTTGTCTTCTTTAACCTTAATATTGTTGCTTTCGTTGTGTTCTGTAACATTGAACAAGAGGTATACTTATTTTGAAGCTCTAGAGGATTGGGAGCTGGATTGTCCTCACAGATTCAGATACAGAGATCTTCACATAGCAACCAAAGGTTTCAAGGAGAGTGAGCTAATTGGAGTTGGTGGCTTTGGTGCTGTCTACAGAGGTGTCTTACCTTCCACTGCAACTGAAGTTGCTGTGAAGAGGATTGTACGAAAGGCATCCCCAAGCTCTGATGTGTATGCTTATGGTGTTTTGCTTCTTGAAGTTGTGAGTGGGAAGAGACCAATTGGGTCAGAGCAATTCTTTTTGGTGGATTGGGTGGTGGAGAATCACAATTTCGGTCAGATTCTTGAAGTGGTTGATCCTAAGTTGGAGTCATTATGTGTTGAGGAAGAGGTGGAATTGGTTCTGAAACTGGGTCTTCTGTGTGCTCAGCATACAGCAGATTCAAGGCCCACCATGAGACAAGTGACGAGGTACCTAAATTTTGATGACCCTCTTCCAGATATTGGGGATTGGAGGAGACAGACAGATTCAGATAGTGGGAGGATGAGCCTGGGTTTCTTAGAAATTGTATCTATGAGTACTTCCTCAACTTCATACAACTTAACCTTTAATAGTAGCGATATAAATAGTAGGCCTAGTCAATCCTGTAGATAG 1203 0.4314 MAASSLTLDFLLHLTLLSLLVSANKAQEMPPFYYEGFDTSDPFSLEVNGSDQGESDTEANDVGINVKGTESDISNRAAYIGKDSRWVNLSMEQSEAVQAWIDYDGDKKVVNVGFSASTGDGKASSRYILGWSFAVNEPARPLDLSKLPNPPPKVKDPSSFPWVNIIIGVLSSLTLILLLSLCSVTLNKRYTYFEALEDWELDCPHRFRYRDLHIATKGFKESELIGVGGFGAVYRGVLPSTATEVAVKRIVRKASPSSDVYAYGVLLLEVVSGKRPIGSEQFFLVDWVVENHNFGQILEVVDPKLESLCVEEEVELVLKLGLLCAQHTADSRPTMRQVTRYLNFDDPLPDIGDWRRQTDSDSGRMSLGFLEIVSMSTSSTSYNLTFNSSDINSRPSQSCR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2110 400 PANTHER - 252 344 - -
Acco07g2110 400 SUPERFAMILY Concanavalin A-like lectins/glucanases 53 241 IPR013320 -
Acco07g2110 400 Gene3D - 33 136 - -
Acco07g2110 400 SUPERFAMILY Protein kinase-like (PK-like) 253 346 IPR011009 -
Acco07g2110 400 Gene3D Transferase(Phosphotransferase) domain 1 215 351 - -
Acco07g2110 400 Pfam Legume lectin domain 45 112 IPR001220 GO:0030246
Acco07g2110 400 ProSitePatterns Protein kinases ATP-binding region signature. 225 253 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2110 Acco-ChrAcco07 38901329 38903582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2110 253 350 Receptor kinase-like Gene Family AT4G29050 40.952 1.68e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco07g2110 Lectin_legB 3e-07 CL0004