Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2107 ATGCTGGTTCAATTAATACATCTCTACGTCCCAAAGCCAAAGATTGAAGAAGACTGTCATGTCAAGTTGTTGAGAAAGTTCAACCTCCATCAAACCAATGAATCTCTAAGCATTATTTTATTCTTAATTCTGATGGCTCCGGCATCATTATCGTCATCAAAGCTTAGTTTCTTCCTCCTCTTTCTTTCACTTTCAGTTGTAGCCAAGGCTCAAGAAGAGGCCAGTTTTACATACCAAGGATTCAATGGTATTGATGAAACTAAACTTATCCGTGAGGGAGCTACCATTGTCAAACCCAGTGGATTGCTTAGGCTCACTGACACAACAAACAATATTGCAGGCCGTGCTTTCTACTCCCAACCTATTCGAATGCGTTCTAATTCAACCTCACGCCAAAAAGCTTTTTCCTTCAGCACATCCTTTGTTTTCTCCATTGTCTCCTCAACCTCTGACCCAGGAGGTTTTGGCCTTGCTTTCGCCATAGCACCAAAAGCCAATTTCCCAGAGGCGGAAGCTGAACACTATCTTGGTCTTTTTAATGGAAGCAATGAAGGGAGCACCTCAAATCACATATTTGCAGTTGAATTTGATACGGTTAATGGCTTCGATAAAGGTGAGTCTGATACCCAAGGTAACGATGTTGGGGTCAATCTCAATGGCATGACCTCAATAGTTAAGGAATCAGCTGCTTACACTGTTGAACAAGGCCCAGATGCTCCAAAGAAGGAAAACATCAGTTTGGAGCAAGTTGGTGCTGTACAAGCTTGGATAGATTTTGATGGTGATGAGCAAATTTTGAATGTGACGATAGCTCCAATACCAGAACCTAAACCTTCCAAACCACTTATACCCAATCATCCCATCAACCTTACTGGTAATTTGACAGAAATCGTGTATATTGGTTTCTCAGCATCAACAGGGAGGAACAAAGCAAGCTCTCATTACATTCTGGGGTGGAGCTTTGCAGTCAATGCACCTGCTCCTTTGCTTAACATTTCCAAGCTTCCTCTTCCACCACCAAAAGTGAAAGACCCTTCCTCTTTTCCTTGGGTCAACTTTGCCATAGGAGTTTTGTCTGCTTTAACCTTAATATTGTTGTTTTCTTTGTGTTCTGTAACATTGTACAAGAGATGCACCAATTTTAAAGCTCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCACATAGCAACCAAAGGCTTCAAAGAGAGTGAGCTAATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTCTTACCTTCCACTGGAACTGAAGTTGCTGTGAAGAGGATTGTTCGAAGCCCGGTCCAAGGAATGAGGGAATTCGCAGCTGAGATTGAAAGCTTAGGAAGATTAAGACACAAAAATTTAGTCAAGCTTCAAGGATGGTGTAAGCAAAAAAATAACCTCCTTCTAATCTATGACTATATCCCAAATGGAAGTCTTGACTCACTCCTCTATAACCAAAGCCTTGTTTTGAATTGGGACCAAAGGTTCAATATCATCATAGGCATAGCTAATGGACTATTGTATCTTCATGAAGAGTGGGAACAAGTGGTGGTCCATAGGGACATCAAAACCAGCAATATCCTCATAGATTCAGATTTAAATGCTCGTTTGGGTGATTTTGGCCTCGCTAGGCTATATGATCATGGTGAGCTATTACATACAACCAATGTGGTTGGGACAATTGGGTATATCGCACCAGAAGTAACTCGCACAGGGCAGGCTTCTACAAGTTCTGATGTGTATGCTTTTGGGATTTTGCTCCTTGAAGTGGTTAGTGGGAGAAGACCCATCGGCTCAGGGCAATTCATTTTGGTAGATTGGGTCATTGAGAATCATCGCTTGGGTCAGATTCTTGAAGTCATTGATCCAAACTTGAACTCAGTTTATGCAGAAGAGGTGGAATTGGTTCTAAAACTGGGTCTTCTTTGTTCCCAATATAATGATGAATCAAGGCCCACCATGAGGCAGGTGACACGGTACCTAAACTTTGATGACCCTCTTCCTAGTATTGCTGGTATCAGGCACAAGTATTCACAGAGCAACACAATGAGCTTGGATTTCTTTGAAGGTGAGAGTCAAAGGGCAATCTCAACTTCTCTTAATTCGTCCTTCATTGTTAGCATGAATAGCATGTCTAAAGAAGCAGATAGTTCAGCATATACGAAATCTTGCTAG 2205 0.4181 MLVQLIHLYVPKPKIEEDCHVKLLRKFNLHQTNESLSIILFLILMAPASLSSSKLSFFLLFLSLSVVAKAQEEASFTYQGFNGIDETKLIREGATIVKPSGLLRLTDTTNNIAGRAFYSQPIRMRSNSTSRQKAFSFSTSFVFSIVSSTSDPGGFGLAFAIAPKANFPEAEAEHYLGLFNGSNEGSTSNHIFAVEFDTVNGFDKGESDTQGNDVGVNLNGMTSIVKESAAYTVEQGPDAPKKENISLEQVGAVQAWIDFDGDEQILNVTIAPIPEPKPSKPLIPNHPINLTGNLTEIVYIGFSASTGRNKASSHYILGWSFAVNAPAPLLNISKLPLPPPKVKDPSSFPWVNFAIGVLSALTLILLFSLCSVTLYKRCTNFKALEDWELDCPHRFRYRDLHIATKGFKESELIGVGGFGAVYKGVLPSTGTEVAVKRIVRSPVQGMREFAAEIESLGRLRHKNLVKLQGWCKQKNNLLLIYDYIPNGSLDSLLYNQSLVLNWDQRFNIIIGIANGLLYLHEEWEQVVVHRDIKTSNILIDSDLNARLGDFGLARLYDHGELLHTTNVVGTIGYIAPEVTRTGQASTSSDVYAFGILLLEVVSGRRPIGSGQFILVDWVIENHRLGQILEVIDPNLNSVYAEEVELVLKLGLLCSQYNDESRPTMRQVTRYLNFDDPLPSIAGIRHKYSQSNTMSLDFFEGESQRAISTSLNSSFIVSMNSMSKEADSSAYTKSC 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2107 734 SUPERFAMILY Protein kinase-like (PK-like) 390 674 IPR011009 -
Acco07g2107 734 ProSiteProfiles Protein kinase domain profile. 407 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2107 734 SMART serkin_6 407 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2107 734 Pfam Protein kinase domain 407 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2107 734 PANTHER - 65 674 - -
Acco07g2107 734 FunFam L-type lectin-domain containing receptor kinase V.9 73 326 - -
Acco07g2107 734 CDD lectin_legume_LecRK_Arcelin_ConA 75 324 IPR001220 GO:0030246
Acco07g2107 734 Gene3D Transferase(Phosphotransferase) domain 1 484 682 - -
Acco07g2107 734 FunFam Lectin-domain containing receptor kinase VI.3 392 483 - -
Acco07g2107 734 Pfam Legume lectin domain 74 335 IPR001220 GO:0030246
Acco07g2107 734 CDD STKc_IRAK 413 672 - -
Acco07g2107 734 FunFam L-type lectin-domain containing receptor kinase S.4 484 683 - -
Acco07g2107 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Acco07g2107 734 Gene3D - 70 326 - -
Acco07g2107 734 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Acco07g2107 734 SUPERFAMILY Concanavalin A-like lectins/glucanases 74 340 IPR013320 -
Acco07g2107 734 Gene3D Phosphorylase Kinase; domain 1 392 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2107 Acco-ChrAcco07 38874017 38876592 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2107 65 680 Receptor kinase-like Gene Family AT3G08870 52.623 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco07g2107 Pkinase 6.9e-51 CL0016