Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2095 ATGGACGTCGACGGAACTTCTAAACCCAAAGAGGAAAAGCTCTTATTGGTCATGTTAGTGGGAGCACCAGGGAGTGGCAAGTCCACTTTCTGCGAAGAAGTTATGCGTTCTTCTACTCGTCCTTGGGTTCGCGTTTGCCAGGATATCATCAAAAATGGAAAAGCAGGAAATAAAGCGCAGTGTCTATGCAATGCCGCTGAAGCATTGAAGGGTGGAAAGAATGTATTTATTGACAGATGCAATCTTGATAGAGAACAGCGTTCCGGATTTGCAGAGCTTGGTGGACCCCAAATAGATGTTCACGCCATTGTGCTTGATCTTCCTGCAAAGCTTTGTATTTCTCGATCTGTCAAACGATCTGGACATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCTGTGGTGAATAGAATGCTTCAGAGGAAAGAGCTGCCTACATTAAGTGAAGGATTTAACCGGATAACATTTTGCCAAACTGAGAGTGATGTCAAAGTGGCTACTGACACGTATAGTGCACTTGGACTGCTGGATAATCTTCCACATGGATGTTTTGGCCAAAAAAGTAAAGAGGCCAAAGTTCAAGTGGATATAATGAAGTTCTTCAAAAAGGCTGAGGTCCCAGTTGTTGCTGAGTCTACAGAGAATTGCGGCAGAAATTTTACTTCTCAAAATAATGAGATGATAGATCCCTGCCATAAAGATATGGAAAAATTTTCATCAAATTCAGATAAAGCCAACTTAGAGCCAGTGAATGTTGAAAATATCTCAGAAGGATCCACTGTTCCTCATGGTGATCATGCTTTCATGAGTGATGTTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTTGACCATGAGAAGGCTGGTGAGATTATTGTGGAGAGAGTTGCGGAGTTCTCAAATAAGCTTGTGAATTTTAGATTTGTTTTAGTTGACTTGAGCCATGGTTCAAAGATTCTGTCTATAGTTAAAGCCAAAGCTGCTAAAAAAAACTTAGACCCCAGAAAGTTTTTTACCCATGTTGGGGACATTACCTGCCTTAGGTCCAAAGGAGACTTGCACTGTGCTGTGATAGCTAATGCTGCCAACTGGCGATTGAAACCTGGAGGTGGAGGGGTTAATGCTGCAATCTTCGAGGCTGCAGGTCCTGTCTTGGAGTCTGCAACCAAAGAGCGGGCACAAGTGCTTTTGCCTGGGAATGCTTTTGCTGTCCCTCTACCATCATCTTCTCCTTTGTTTACTAGAGAGGGAGTAACCCATGTGATACATGTTCTTGGGCCAAATATGAATCCACAAAGGCCAGATTGTCTCAATAATGATTACAATAAAGGCTGCAAGATTCTTAGAGAGGCTTACACTTCACTATTTGAAGCTTTTGCATTGATCGTGAGGACTGGGACAGAGCAAAAGAGCAAGAGAGATACTGATCATGAATCTGGAAAAAGCAAGAAATACAAGGGAAGTCAGGTTGATGTTGAACTTAACTGTACTGGTACCAAGGTTGTAAACATAGATTCAAGTGATAAAAAAAGTGACGCCAGCTTGAATAAGACATGGGGATCATGGGCTCAAGCTCTTCATCAAATAGCTATGCACCCTGAGAAGCATAAGGATGATTTGCTTGAAATATCCGAAGATGTAGTTGCGCTGAATGATCTGTATCCTAAGGCAAAGAAGCATGTTTTGGTGTTGGCACGAACTAAAGGCCTCGATTGCCTGGCTGACATTCAAAATGACCACCTTCACTTGCTAAAGAGGATGCATGATGTGGGTCTAAAGTGGGCTGAGAAGTTCTTACATGAGAATACTTCATTAGTTTTTCGTCTTGGATATCACTCGGCTCCATCAATGCGACAACTTCATTTACATGTTATTAGCCAGGACTTTGACTCAAAACATTTGAAGAACAAGAAGCATTGGAACTCGTTCAACACCGATTTCTTCCGTGACTCGGTAGCTGTAATTGATGAGGTCTCCAATAATGGGAAAGCAACATTGAAAGATGATGACAAACTGCTGTCCATGGAGTTGAGGTGCCATAGATGTAGAAGCGCACACCCTAACATTCCCAGGTTAAAATCTCATATCAGCAGTTGTAAAGCTTCCTTTCCTCCTTTCTTGCTTCAAAATGGCCGTTTGGTTTGTGGACAAGGTGAAGTTAACATCAGTTCATAA 2187 0.4216 MDVDGTSKPKEEKLLLVMLVGAPGSGKSTFCEEVMRSSTRPWVRVCQDIIKNGKAGNKAQCLCNAAEALKGGKNVFIDRCNLDREQRSGFAELGGPQIDVHAIVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQRKELPTLSEGFNRITFCQTESDVKVATDTYSALGLLDNLPHGCFGQKSKEAKVQVDIMKFFKKAEVPVVAESTENCGRNFTSQNNEMIDPCHKDMEKFSSNSDKANLEPVNVENISEGSTVPHGDHAFMSDVPTLAFPSISTSDFQFDHEKAGEIIVERVAEFSNKLVNFRFVLVDLSHGSKILSIVKAKAAKKNLDPRKFFTHVGDITCLRSKGDLHCAVIANAANWRLKPGGGGVNAAIFEAAGPVLESATKERAQVLLPGNAFAVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPDCLNNDYNKGCKILREAYTSLFEAFALIVRTGTEQKSKRDTDHESGKSKKYKGSQVDVELNCTGTKVVNIDSSDKKSDASLNKTWGSWAQALHQIAMHPEKHKDDLLEISEDVVALNDLYPKAKKHVLVLARTKGLDCLADIQNDHLHLLKRMHDVGLKWAEKFLHENTSLVFRLGYHSAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTDFFRDSVAVIDEVSNNGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCKASFPPFLLQNGRLVCGQGEVNISS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2095 728 PANTHER APRATAXIN-RELATED 275 703 - -
Acco07g2095 728 FunFam Transcription factor bHLH140 4 172 - -
Acco07g2095 728 Pfam C2HE / C2H2 / C2HC zinc-binding finger 648 701 IPR032566 -
Acco07g2095 728 MobiDBLite consensus disorder prediction 471 490 - -
Acco07g2095 728 FunFam Transcription factor bHLH140 321 468 - -
Acco07g2095 728 Gene3D - 525 706 IPR036265 -
Acco07g2095 728 ProSitePatterns HIT domain signature. 612 630 IPR019808 -
Acco07g2095 728 Gene3D - 4 171 IPR027417 -
Acco07g2095 728 Pfam Macro domain 363 438 IPR002589 -
Acco07g2095 728 FunFam aprataxin isoform X2 524 704 - -
Acco07g2095 728 SUPERFAMILY Macro domain-like 333 461 IPR043472 -
Acco07g2095 728 Pfam Scavenger mRNA decapping enzyme C-term binding 532 643 - -
Acco07g2095 728 Gene3D Leucine Aminopeptidase, subunit E, domain 1 319 462 IPR043472 -
Acco07g2095 728 SMART YBR022w_8 340 479 IPR002589 -
Acco07g2095 728 SUPERFAMILY HIT-like 521 687 IPR036265 -
Acco07g2095 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 159 IPR027417 -
Acco07g2095 728 Pfam AAA domain 16 144 - -
Acco07g2095 728 ProSiteProfiles Macro domain profile. 328 534 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2095 Acco-ChrAcco07 38785730 38789607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2095 13 719 C2H2 Transcription Factor Family AT5G01310 59.471 0.0 846