Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2040 ATGGCTTCCAATAATAATCTCTCTTCATCTTCTGATGCCTCTGCTAAAGAACGCCTTCGTTGGACTCAGCAACTTCATGATCTCTTCGTTGAAGCTGTCAACAGACTTGGTGGCCCTGATCGAGCAACACCAAAGAGTATAGTGAAAGAGATGACGAATATGGGGATATCTGGAATCACCATTTATCACGTCAAAAGCCACTTGCAGAAATACAGGATCAACAAGTTAATTCCCGAGTCTGCTCCTGGAAGCAAGCTTGAGAGAAGAAGCATATCGGACATACTGCGTAATTTCAGCACTTTAACCCCGTTGCAGCTTAAGGAGGCCCTACACTTGCAAATGGAAGTACAAAAACGATTGAGCGACCAGCTAGCGGTTCAAAGGAGATTGAAGTTAAAAATGGAAGCTCAAGGGAAGTACTTGGAGAGACTGGGTCAAACTTATAAAAAATCAACGATCTCCACAAAACCTGATGGGAATAATAAGCTTCATGTTAATAATAATACTGCATCTACGACGACTTCAATGTCTTGTCTTTCTGAGGAATCTGATGATATTCAACCTACTCATTATGGTTCCAAACACAGTAGGTCCAACGTTGTCACTCACAAAAAGCAAAGAATCGTCGTCCAAGATGATGCTATTACGGTTAATAATTTCCCAACAAGTTTGGATCAGCTTTCTTCTTCATCGTCGTCGTCGTCATCACCTACTCCAGAATTCTGCAACCAAAACTGGGACCTACTTCCTTGGAATCAGCTCGCAGCTTCATTTCCATGTGAATCATCCTTGGTTCCAAGCTACTTGTTGTAA 813 0.4207 MASNNNLSSSSDASAKERLRWTQQLHDLFVEAVNRLGGPDRATPKSIVKEMTNMGISGITIYHVKSHLQKYRINKLIPESAPGSKLERRSISDILRNFSTLTPLQLKEALHLQMEVQKRLSDQLAVQRRLKLKMEAQGKYLERLGQTYKKSTISTKPDGNNKLHVNNNTASTTTSMSCLSEESDDIQPTHYGSKHSRSNVVTHKKQRIVVQDDAITVNNFPTSLDQLSSSSSSSSSPTPEFCNQNWDLLPWNQLAASFPCESSLVPSYLL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2040 270 Gene3D - 15 76 - -
Acco07g2040 270 NCBIfam myb-like DNA-binding domain, SHAQKYF class 16 74 IPR006447 GO:0003677
Acco07g2040 270 MobiDBLite consensus disorder prediction 174 205 - -
Acco07g2040 270 FunFam Two-component response regulator 12 76 - -
Acco07g2040 270 SUPERFAMILY Homeodomain-like 15 73 IPR009057 -
Acco07g2040 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 237 IPR044848 GO:0003700
Acco07g2040 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 76 IPR017930 -
Acco07g2040 270 MobiDBLite consensus disorder prediction 174 196 - -
Acco07g2040 270 Pfam Myb-like DNA-binding domain 19 72 IPR001005 -
Acco07g2040 270 Pfam MYB-CC type transfactor, LHEQLE motif 105 144 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2040 Acco-ChrAcco07 38112886 38115712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2040 8 144 G2-like Transcription Factor Family AT4G28610 49.650 2.62e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco07g2040 Myb_DNA-binding 1.2e-06 CL0123