Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2035 ATGGCGGACTCACATTCCGCTACATTTCAACCTCCTTCTGTTGCTTCATCTTCATCTTCTTCTGCAGCCATTCGAGACCCTTCTGGAGCTACTACTTCGTCGACTGCAGGATCTTCACGACTACGCCGTCGCCAAGAGGAAAGTCGAAGTCATCATCCTCGTTCTCAATCCCCTGGACTAGAGCAGCAGAATTTGAACGTCCTCAATTGGACATATCAAAATGCGTCTTCAATGTCTAGGGATGATTCTTGGTCCTGCCTCGTTGTTCTTTTCACCTTTTGGTTCTTCGTGTCGATGACTCTGATACTTGGAGTTTACGGGTCAATGAACCTCCTGCTTAGTCCAAGTGCTTCCATTCTTCTCCAACCTAGCCCCTTATTCGTGCAATCTATAAAGGTAGAAAACTTAGGATCCAAGCCTGGAGTCATGCTCTATGGCACATACGGAATTCCCTCTCTTGATGTTTTTACTGTTTGGACAGAAACTCGTAATGCAACCGTTCCATCTGATGTGCATAAGGAATGGAAATATTACCTGAATGAAGGGTCTCAAGTAAATATTTCCTACCGCTTGAGCTCTGAGAACCCTTCTACTGTTCTTGTAATTGCCGAAGGGGAAGACGGCCTGTCTCAGTGGCTGGAATATCCATCATATCCTAATAGCACACTGTCGTGGAACATAATCCAAGGAACTGGTATTGTTACACAGGACATATTCCGTTCATCGTACTATTATTTGGCACTAGGAAATCTGGATGATGAGGAGGCAGTAGAGGTGAACCTGATCATCAGTGTACGGGCTGCCATGTATAATACAACAGATGCTTATTACAAATGTACTTTGACTAGTGAGCCATGCGGTTTGAATGTTTTCTTTCCTGATGGGAATGCAGCTATCTTAACATCTCCTGTACCACAACTGAACACATCCAGTAATCAGTGGTATGTCAAATTGTCCTATGGACCAAGATGGCTCACATATATTTTTGGCATGGGTGGATTGACTTTGCTTATATTTTTGGCCTTCAACTGCTTTAACAAGCTGCAATATCCTCAAGAAGATAGAAATGAGGGAACAGATCCTGAAAGAGTCCCTTTGCTTTCTCCCAAAGATGACGATCTTTCCAGCTGGGGTTCATCATATGATTCCGTGTCACAAGATGAGGAGGATCTTGATCTTCTCATTGGGGATTCCATCAATGGGAAGTCTTTAGCTGATGGTGAAACCAGTAATAGTACAAGGCGCCTTTGTGCAATATGCTTTGATGCTCCACGGGACTGCTTCTTCCTTCCTTGTGGACATTGCGTGGCTTGTTTTGAATGTGCAACAAGGATTGCAGAGGCAGAGGGTACTTGCCCAGTATGTCGTAGGAGCATGAAGAAGGTGAGGAAGATATTTACTGTTTAA 1407 0.4407 MADSHSATFQPPSVASSSSSSAAIRDPSGATTSSTAGSSRLRRRQEESRSHHPRSQSPGLEQQNLNVLNWTYQNASSMSRDDSWSCLVVLFTFWFFVSMTLILGVYGSMNLLLSPSASILLQPSPLFVQSIKVENLGSKPGVMLYGTYGIPSLDVFTVWTETRNATVPSDVHKEWKYYLNEGSQVNISYRLSSENPSTVLVIAEGEDGLSQWLEYPSYPNSTLSWNIIQGTGIVTQDIFRSSYYYLALGNLDDEEAVEVNLIISVRAAMYNTTDAYYKCTLTSEPCGLNVFFPDGNAAILTSPVPQLNTSSNQWYVKLSYGPRWLTYIFGMGGLTLLIFLAFNCFNKLQYPQEDRNEGTDPERVPLLSPKDDDLSSWGSSYDSVSQDEEDLDLLIGDSINGKSLADGETSNSTRRLCAICFDAPRDCFFLPCGHCVACFECATRIAEAEGTCPVCRRSMKKVRKIFTV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2035 468 FunFam E3 ubiquitin-protein ligase APD2 406 467 - -
Acco07g2035 468 Pfam Domain of unknown function (DUF4792) 142 209 IPR032008 -
Acco07g2035 468 Pfam Zinc finger, C3HC4 type (RING finger) 414 462 - -
Acco07g2035 468 MobiDBLite consensus disorder prediction 1 39 - -
Acco07g2035 468 SMART ring_2 417 455 IPR001841 -
Acco07g2035 468 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 401 468 IPR013083 -
Acco07g2035 468 ProSiteProfiles Zinc finger RING-type profile. 417 456 IPR001841 -
Acco07g2035 468 PANTHER OS05G0521000 PROTEIN 54 468 - -
Acco07g2035 468 MobiDBLite consensus disorder prediction 353 369 - -
Acco07g2035 468 SUPERFAMILY RING/U-box 416 462 - -
Acco07g2035 468 MobiDBLite consensus disorder prediction 353 379 - -
Acco07g2035 468 MobiDBLite consensus disorder prediction 1 60 - -
Acco07g2035 468 MobiDBLite consensus disorder prediction 40 54 - -
Acco07g2035 468 Pfam Domain of unknown function (DUF4793) 234 340 IPR032010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2035 Acco-ChrAcco07 38069739 38074014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2035 390 465 C3H Transcription Factor Family AT3G06140 28.947 2.78e-06 47.4