Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2026 ATGAATGAATTAGCGGCGGTGGCTTATGGAGCCGGAGAGGCGTTGGTGGTAGAAAAAGTGAAAGTTCATCCGCCGCAGAAGAAGGAGGTCCGAATCAAGATCCTCTCTACTTCTATCTGCCACACTGATCTCTCTGCCTGGCTCGGCGAGAATGAAGCTCAAAGGGCATATCCTAGGATTCTTGGCCATGAAGCCTGCGGGATAGTGGAGAGTGTAGGGGATGGAGTAAAGGATGTGAAAGAAGGAGATTATGTGGTACCTTTATTCAACGGCGAGTGTGGCCATTGCAAGTTGTGCAAGTGTCCCCACACCAACATGTGCCAACACTTTGGAGTCAACCCCATGAAGAAGGACATGGTGGCTGACGGCGCCACCAGGTTCACCACCGTCCACGGTGACAAACCCATCTACCATTTCCTCAACACCTCCACCTTCACCGAGTACACCGTCGTTGACTCCGCTTGCGTCGTCAAACTCAGCGGCCTCGTCGATCAAAATAGCCTCAAAAAGCTCACCCTACTCAGCTGTGGCGTTTCTACAGGGGTTGGAGCAGCATGGAACACAGCCAATGTGCAATCTGATTCTACTGTTGCTGTCTTCGGTTTGGGAGCCGTCGGCCTCGCTGCGGCTGAAGGGGCGAGAGCAAGAGGGGCATCCAAAATAATAGGCATTGACGTCAACCCCGACAAATTCATCAAAGGCCGGGAGATGGGAGTGACGGATTTCATAAATCCAAAGGATGAAGATAAGCCTGTCTACGAGATAATAAGAGAAATGACTGGAGGAGGAGTAGACTTCAGCTTTGAATGTGTAGGAAACTCTGATGTCCTCCGAAATGCCTTCCTGTCTGTTCATGAGGGATGGGGATTGACGGTAATATTGGGAATACATACAACACCACAAATGCTTCCAATTCATCCAATGGAGCTGTTTGATGGTCGCAGAGTCGTTGCTTCTGTCTTTGGAGGCTTCAAAGGAAGGTCCCACCTCCCTCTGTTTGCCAAACAATGCCTGCAAGGAGTGGTGAAGCTGGAGGGGTTCATTACTCACGAGCTACCCTTTGAAGACATCAACAAAGCCTTTGATCTTTTGGTCTCCGGCAAGTCACTGAGATGTCTCCTACACCTGTGA 1131 0.5031 MNELAAVAYGAGEALVVEKVKVHPPQKKEVRIKILSTSICHTDLSAWLGENEAQRAYPRILGHEACGIVESVGDGVKDVKEGDYVVPLFNGECGHCKLCKCPHTNMCQHFGVNPMKKDMVADGATRFTTVHGDKPIYHFLNTSTFTEYTVVDSACVVKLSGLVDQNSLKKLTLLSCGVSTGVGAAWNTANVQSDSTVAVFGLGAVGLAAAEGARARGASKIIGIDVNPDKFIKGREMGVTDFINPKDEDKPVYEIIREMTGGGVDFSFECVGNSDVLRNAFLSVHEGWGLTVILGIHTTPQMLPIHPMELFDGRRVVASVFGGFKGRSHLPLFAKQCLQGVVKLEGFITHELPFEDINKAFDLLVSGKSLRCLLHL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2026 376 SMART PKS_ER_names_mod 10 370 IPR020843 GO:0016491
Acco07g2026 376 Pfam Alcohol dehydrogenase GroES-like domain 28 157 IPR013154 -
Acco07g2026 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 340 IPR036291 -
Acco07g2026 376 SUPERFAMILY GroES-like 325 375 IPR011032 -
Acco07g2026 376 PANTHER ALCOHOL DEHYDROGENASE 5 373 - -
Acco07g2026 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 62 76 IPR002328 GO:0008270|GO:0016491
Acco07g2026 376 Gene3D - 6 371 - -
Acco07g2026 376 Pfam Zinc-binding dehydrogenase 204 323 IPR013149 -
Acco07g2026 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 181 319 - -
Acco07g2026 376 Gene3D - 181 319 - -
Acco07g2026 376 FunFam Alcohol dehydrogenase 6 6 194 - -
Acco07g2026 376 SUPERFAMILY GroES-like 4 200 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2026 Acco-ChrAcco07 37975540 37981268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2026 27 365 Monolignol Biosynthesis Gene Families AT2G21890 28.448 1.56e-10 60.1