Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2025 ATGCGTAAGTCTTTCAAGGATTCCCTCAAAGCTCTTGAAGCTGATATCCAGTTCGCCAATACCCTAGCTTCTGATTACCCAAGAGATTATGATGGTGCCTGCATCCAAATGAGATTGTCCTACAGTCCAGCAGCCCAATTTTTTCTTTTTCTGGTTCAGTGGACTGATTGTAACCTTGCTGGAGCCTTGGGATTGCTTAGAATTCTTATATACAAGGCATATGAGGATGGTAAGACAACAATGTCCATCTACGAAAGAAAAGCCAGTCTGAAGGAGTTCTATTGCGTGATCTTTCCCTCTTTATTGCAACTCCACAGAGGAATTACTGATGTAGAAGACAGAAAACAAAAAGAAATATGTGCTACTAAGTATAAGTCGAAAGCTGTAGTCAGCAAAGGAAAGCATTCTGAATTTGACACAGAGAGAGAGGAAGAATGTGGTATTTGCATGGAGTTGGGCAGCAAGATTGTATTGCCCAATTGCAATCACTCAATGTGTATGAAATGCTTTCGAGATTGGCATGCACGATCAAAGTCTTGCCCTTTCTGCCGGGACAGTCTGAAAAGAGTGAACTCTAGTGACCTTTGGGTGTACATGAACAACAATGAGATAGATGACATGGCCTCAATCACAAGGGAGAATTTAAAGAGGTTATTCATGTACATTGAAAAGTTGCCTCTTCTTGTTCCTGATCCAATATTTATGTCTCGTCCCATCCGCTGGTGA 726 0.4146 MRKSFKDSLKALEADIQFANTLASDYPRDYDGACIQMRLSYSPAAQFFLFLVQWTDCNLAGALGLLRILIYKAYEDGKTTMSIYERKASLKEFYCVIFPSLLQLHRGITDVEDRKQKEICATKYKSKAVVSKGKHSEFDTEREEECGICMELGSKIVLPNCNHSMCMKCFRDWHARSKSCPFCRDSLKRVNSSDLWVYMNNNEIDDMASITRENLKRLFMYIEKLPLLVPDPIFMSRPIRW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2025 241 SUPERFAMILY RING/U-box 137 189 - -
Acco07g2025 241 FunFam RING/U-box superfamily protein 127 193 - -
Acco07g2025 241 SMART ring_2 146 183 IPR001841 -
Acco07g2025 241 PANTHER RING FINGER PROTEIN 41, 151 3 235 - -
Acco07g2025 241 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
Acco07g2025 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Acco07g2025 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 213 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g2025 Acco-ChrAcco07 37929940 37932515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2025 90 188 C3H Transcription Factor Family AT5G01960 30.769 5.21e-07 48.1