Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g2014 ATGATTAGAAATTGCTTCGGTGCCTTGAATTGGTGTACACCTAGATGGAGGAATTATTCTGATGATCAGTCACGCGAACAAGTGATATCAACCAGAACGTTTAGTTATAATTCTTTGAGATCAGCAACAGAAGACTTTCATCCATCCAACAGAATTGGTCAAGGAGGTTATGGTGTTGTCTACAAGGGAGTTTTACGGGATGGAACTCAAGTTGCTATCAAGTCTCTTTCTGTAGGGTCTAAGCAAGGAGCAAGAGAATTTATGACAGAAATTGTTATGATATCAAACATAAGACATCCAAACCTGGTGCAACTAATCGGCTGCTGTATAGAGGACAACCATCGCATATTGGTCTACGAATTTCTGGAAAACAGTTGCCTTGCAAGCTCTTTGCTTGGTTCCAAAAGTAAATGTGTTGCTCTAGATTGGCCAAAAAGGGCTTCCATTTGCCTTGGTACTGCTTCTGCTCTTGCATTTCTTCATGACGACGTTCAGCCAAATATTGTTCATAGAGATATAAAGGCTAGCAACATACTCCTTGATGGAAACTTCAATCCTAAAATAGGGGACTTTGGCCTCGCGAAACTTTTTCCTGACAATGTCACCCATCTGAGTACACGAGTGGCTGGAACTGTGGGATATCTTGCACCAGAATATGCACTTCTAGGTCAGCTTACAAAAAAGGCAGATGTGTACAGTTTCGGCGTTCTCTTGCTCGAAGTAATCAGTGGTAGAAGTAGCAGCAAAGCTGCCTTTGGAGATAAGCTACTGGTTCTTGTGGAATGGACATGGAAGCTGAAAGAAGAAAATAGGCTTCTGGACATTGTTGATCGAGAACTAACTTCGTACGATGAGACTGAGGTCATGCGTTTCATTAAGGTTGCTCTGTTCTGTACCCAAGCAGCTGCTCATCATAGACCGACCATGAAGCAAGTAGTGGAAATGCTGTCCAAGGAAGTTCACCTCAATGACACGGCTTTGACAGAGCCCGGAGTTCATAGATGGCGTCGTGCCTCAAGAAATGCCGTAAATTTTTTGGGTGAGACATCAACTTCTCAGGTGAACAAGCCTAATAGAAGACCTGAAAATTCACACATAACCTCTGAGCAGTTAGGTGATCCTGATATTGTGACAGACATACTTCCAAGATGA 1152 0.4271 MIRNCFGALNWCTPRWRNYSDDQSREQVISTRTFSYNSLRSATEDFHPSNRIGQGGYGVVYKGVLRDGTQVAIKSLSVGSKQGAREFMTEIVMISNIRHPNLVQLIGCCIEDNHRILVYEFLENSCLASSLLGSKSKCVALDWPKRASICLGTASALAFLHDDVQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHLSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLLLEVISGRSSSKAAFGDKLLVLVEWTWKLKEENRLLDIVDRELTSYDETEVMRFIKVALFCTQAAAHHRPTMKQVVEMLSKEVHLNDTALTEPGVHRWRRASRNAVNFLGETSTSQVNKPNRRPENSHITSEQLGDPDIVTDILPR 383
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco07g2014 383 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Acco07g2014 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Acco07g2014 383 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Acco07g2014 383 SMART serkin_6 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2014 383 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g2014 383 MobiDBLite consensus disorder prediction 347 370 - -
Acco07g2014 383 SUPERFAMILY Protein kinase-like (PK-like) 23 316 IPR011009 -
Acco07g2014 383 CDD STKc_IRAK 52 318 - -
Acco07g2014 383 Gene3D Transferase(Phosphotransferase) domain 1 123 330 - -
Acco07g2014 383 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Acco07g2014 383 FunFam cold-responsive protein kinase 1 17 121 - -
Acco07g2014 383 Pfam Protein tyrosine and serine/threonine kinase 49 316 IPR001245 GO:0004672|GO:0006468
Acco07g2014 383 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 341 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco07g2014 Acco-ChrAcco07 37804164 37807433 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g2014 15 331 Receptor kinase-like Gene Family AT1G56120 51.090 4.05e-109 338
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco07g2014 PK_Tyr_Ser-Thr 7.3e-45 CL0016