Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1986 ATGGACGCAGTCGTAAAGTCGCCGGAAAATTCATCGCGGCCCATCGAGAAGGTGACCATACACCCTCTGGTTCTTCTCAGCACTGTCGATCACTACATTCGGCTCTCCCAGTGTCCGCTCCGGCGGGTCGTCGGAGTCTTGCTCGGCAGTTCCTTCGAAGGCACTGTCAATGTTTCCAACAGCTACCCAGTTCCTTTTGATGAAGACGACATGGACCCAAGTGCCTGGTTTCTTGACCTCAACTACGTCGAGAAAATGTTTTCTATGTTCAAGAAAATATATGATAAGGAGCAAATTGTGGGATGGTACAGCACAGGGCCAGAACTCCAAGAGAATGATATGGACATTCACAGCTTATTTCACAAATATGTTCCAAATCCGGTCTTGGTCATTGTTGATGTTCTATCTACAGAACTTGGTATACCCACAAAAGCTTGTTACTGTGATGTTGAAGAAGTGAAGGAGAAGTTGAAAGCTTGTCAAGAGATGTGGAAGATACACTCGAAGCTAAGATTCGGAACCTGGAACTATAGAAAGTTGAAGAGGAAGAGGCAATTGCATTTGTCTATGGAGTTCCTTGAGAAATCAGAACTGAAGTTGCATTTGAGACATTTTTGGTATATTCGTAACAGTTTTGTGGTCAATAATGAATGAGGCGACATAACCAAGGCAACAAACTTGGAGGACATACAAGGTCTTGGAGGCCTGATGACAAGAGCAAAAGCTAAAAAGGCTAAAGAGACAAGCTTCTCTAGGGTTCTTGTGAGAATCTCTGAACTTATCAAGGGCATCGATCCTTGTGGCGTTCTTGGGCTTATCAAATTCCCTTATCCTTTTTTGGTGTTTTTTGAGTCAAAATCGTGGTTCAAAAAGCCATCTTTCTCCTCGTTTTGGAAGCACTCCATTCTGAGTTCTGAATTAGTACAATTTCAAAGTTTGATTTCAAAATCCCAAATTCCTCTTGTTGAAGAATCAGGTGCAGGTGGTGAAGGTACTTTTACTCTTGATAATATATTGCTAATTGAAGCCATTACAACTCAAATGCAAAGGATGATAAGGGAACACACAGAGAAGCTATATGAGAGAATTGAGAGAATAGAAACTCAGGGGAATCATGATGAAGATAGACAGAAAGGGAGGGATGAAAGAAGGAGAAGAAGAGATAATGAGACTGATGCTAGAGAGGATAGAATTAAGGGAGTGAAGCTTAATATACCATCTTTTAAAGGGAAAAATGACCCGGAGGCCTATTTAGAGTAG 1260 0.4175 MDAVVKSPENSSRPIEKVTIHPLVLLSTVDHYIRLSQCPLRRVVGVLLGSSFEGTVNVSNSYPVPFDEDDMDPSAWFLDLNYVEKMFSMFKKIYDKEQIVGWYSTGPELQENDMDIHSLFHKYVPNPVLVIVDVLSTELGIPTKACYCDVEEVKEKLKACQEMWKIHSKLRFGTWNYRKLKRKRQLHLSMEFLEKSELKLHLRHFWYIRNSFVVNNEXGDITKATNLEDIQGLGGLMTRAKAKKAKETSFSRVLVRISELIKGIDPCGVLGLIKFPYPFLVFFESKSWFKKPSFSSFWKHSILSSELVQFQSLISKSQIPLVEESGAGGEGTFTLDNILLIEAITTQMQRMIREHTEKLYERIERIETQGNHDEDRQKGRDERRRRRDNETDAREDRIKGVKLNIPSFKGKNDPEAYLE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1986 419 MobiDBLite consensus disorder prediction 370 419 - -
Acco07g1986 419 Gene3D Cytidine Deaminase, domain 2 10 176 - -
Acco07g1986 419 SMART pad1_6 17 155 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco07g1986 419 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 12 176 - -
Acco07g1986 419 MobiDBLite consensus disorder prediction 370 402 - -
Acco07g1986 419 ProSiteProfiles MPN domain profile. 18 153 IPR037518 -
Acco07g1986 419 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 16 125 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1986 Acco-ChrAcco07 37431247 37436828 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1986 6 133 Eukaryotic Initiation Factors Gene Family AT2G39990 37.209 2.37e-18 83.2