Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1984 ATGGACGACGTGGTTAACTCGCCAGAAAGTTCATCGATTCCCATCAAGAATGTGATAGTACACCCTCTCGTTCTTCTAAGCGTCGCAGATCACTACTATCGGAACTACGGGGACTCCGAGTCCAAGGAACCGATCGGGCGGGTCGTCGGAGTCTTGCTCGGCAGCTGCTTCCGAGACACTGTCGAAGTTTCCAATAGCTATGGAGTTCCTTTTGAGGAAGAGGGAAAGGACCCAAGTTTCTGGTTCCTTAACCCCGACTACGTCGAGGATATGTTTTGTTTGCTCAATGAATTAAACGCTACGGAGCATATTGTGGGATGGTACAGCACAGGCCCAAACCTTCGAGAGGTAGATATGCAAATCCACAGATTATTCCAAAGATATGTTCCAGATCCGGTCTTGGTCATTGTTGATGTGCGACCAACGGAGCATAGTTTACCCACAAAAGCTTTCTGTGATGTTGAAGAATCGAAGAAGAATGCTACACAAATAGGTCACAATGTTTTTGTTCATGTCCCTTCTGAAATTGCTGCCGATGAGGCTGAGGAAATTGGAATTGAACACTTATTAAGAGAAGTGAAACATACAACCTTCTGTACACTTGAAACTGAGGTTTTTGATAAACTTTCAGCCTTAAAGGAATTACATACTCTCTTAAAAGAAAAAATAAGTTGGTACCTCGGTATGGCTGTTTCGGGATTGTTTCCATCAAACCGTGAGATACTTTGGAATCTACAGGATATGCAAAACTATTTGCTGAATCCCAATGACTCTGAGTTAATCAAGGCCCTTACAGTAAAAACAAACGACATGATGATGGTCCTATTTCTTTGCTTTATCATCCGTTGTGTCATTGCGCATCACAACTTGATAAACAACAAGATAATGAACAAGGAACTCGAGGAAGCTAAAGATGCAGGGATAGTTGCATTTGATTATGGAGTTCCTTGA 951 0.4259 MDDVVNSPESSSIPIKNVIVHPLVLLSVADHYYRNYGDSESKEPIGRVVGVLLGSCFRDTVEVSNSYGVPFEEEGKDPSFWFLNPDYVEDMFCLLNELNATEHIVGWYSTGPNLREVDMQIHRLFQRYVPDPVLVIVDVRPTEHSLPTKAFCDVEESKKNATQIGHNVFVHVPSEIAADEAEEIGIEHLLREVKHTTFCTLETEVFDKLSALKELHTLLKEKISWYLGMAVSGLFPSNREILWNLQDMQNYLLNPNDSELIKALTVKTNDMMMVLFLCFIIRCVIAHHNLINNKIMNKELEEAKDAGIVAFDYGVP 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1984 316 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 16 130 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco07g1984 316 SMART pad1_6 17 156 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco07g1984 316 Gene3D Cytidine Deaminase, domain 2 10 200 - -
Acco07g1984 316 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 11 296 - -
Acco07g1984 316 ProSiteProfiles MPN domain profile. 18 157 IPR037518 -
Acco07g1984 316 Pfam Maintenance of mitochondrial structure and function 180 292 IPR024969 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco07g1984 Acco-ChrAcco07 37414028 37416479 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1984 7 238 Eukaryotic Initiation Factors Gene Family AT2G39990 30.380 5.50e-21 89.4