Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1982 ATGGACGCAGTTGTAAAGTCGCCGGAAAGTTCATCGATTCCCGTCAAGAATGTGATAGTACACCCTCTCGTTCTTCTAAGCATCGCCGATCACTACCATCGGAAGTCCAGGGAACCGAGCGGGCGGGCCATCGGAGTCTTGCTCGGCAGCTCCTTCGACGGCACTGTCGAAGTTTCCAATAGCTATGCAGTTCCTTTGGAGCTGGAAGAAAGAGTGAACCCAAGTGTCTGGTTCATTAGCCCCGACTACGTCGACAAAATGTTTTATATGTTCGAGAAAGTAAACGCTACGGAGCATATTGTGGGATGGTACAGTACAGGCCCAAAATTTGAAGAGGATGATATGGACAACCAAAGATTCTTCCGCAGATATGTTCCAAATCCGATCTTGGTCATTGTTGATATGAGACCTTCGGAGCATAGTTTATCCGCAAGAGCTTTCTGTGATGTTGAAGAATCGAAGACGGCTGCTACACAAGTAGGTCAAAAGGTTTTTGTTCATGTCCCTTCTGAAATTATTGCTGATGAGGCTGAGGAAATTGGAATTGAACACTTATTAAGAGAAGTGAAACATAAAACCTTCAGTACACTTGAAACTGAGGTTGCTGATAAACTTTCGGCCTTAAAGGAATTACATACTCTCTTAAAAGACAAAATAAGTTGGTACCTCGGTATGGCTGTTTCGGGATTGTTTCCATCAAACCGTGAGATACTTTGGAATCTGCAGGATATGCAAAACTATTTTCCGAATCCCAATGACCCTGAGTTAATCAAGGCCCTTACAGTAAAAACAAACGACATGATGATGGTCCTATTTCTTTGCTTTATCATCCGTTGTGTCATTGCGCATCACAACTTGATAAACAACAAGATAATGAACAAGGAACTCGAGAAAGCTAAAGATGCAGGGATAGTTGCATTTGATTATGGAGTTCCTCCTTGA 942 0.4289 MDAVVKSPESSSIPVKNVIVHPLVLLSIADHYHRKSREPSGRAIGVLLGSSFDGTVEVSNSYAVPLELEERVNPSVWFISPDYVDKMFYMFEKVNATEHIVGWYSTGPKFEEDDMDNQRFFRRYVPNPILVIVDMRPSEHSLSARAFCDVEESKTAATQVGQKVFVHVPSEIIADEAEEIGIEHLLREVKHKTFSTLETEVADKLSALKELHTLLKDKISWYLGMAVSGLFPSNREILWNLQDMQNYFPNPNDPELIKALTVKTNDMMMVLFLCFIIRCVIAHHNLINNKIMNKELEKAKDAGIVAFDYGVPP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1982 313 Gene3D Cytidine Deaminase, domain 2 10 196 - -
Acco07g1982 313 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 10 292 - -
Acco07g1982 313 SMART pad1_6 17 152 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco07g1982 313 ProSiteProfiles MPN domain profile. 18 153 IPR037518 -
Acco07g1982 313 Pfam Maintenance of mitochondrial structure and function 176 288 IPR024969 -
Acco07g1982 313 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 126 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1982 Acco-ChrAcco07 37372732 37375188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1982 7 249 Eukaryotic Initiation Factors Gene Family AT2G39990 30.242 5.60e-20 86.3