Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1976 ATGAACAGGGGAATTGAAGCACTCTCTCCGGCCTCCTACCTCCAGAACTCTAATTGGCTATTCCAGGAAGGCAAAGGAACTATATGGACTCCAGAAGAGAACAAGCGATTTGAGAACGCTTTGGCTCTGTATGATAAGGAGACACCAGATCGTTGGATGAAGGTGGCTGCCATGATTCCAGGCAAGACTGTGGGTGATGTGATCAAACAGTACAGAGAACTGGAAGAAGATGTGAGTGTCATTGAGGCAGGGCTGTTCCCAATTCCTGGGTACACTAATAGCTCTTTCACATTGGAGTGGGTCAATGGCCGAGGCTTTGATGGGTTCAATCAATTTTATACTTCTAGTGGAAAAAGAGGTACCCCCACTAGGCCTTCTGAGCAGGAAAGGAAGAAAGGAGTTCCATGGACTGAAGAGGAGCACAGGCAGTTTCTGATGGGGCTGAAGAAGTATGGCAAAGGGGACTGGAGAAACATCTCTCGCAATTTCGTGACCACAAGGACGCCAACTCAGGTCGCGAGTCATGCTCAGAAGTATTTCATCAGGCAGCTTACAGGAGGGAAAGATAAGAGGAGATCCAGTATCCATGATATCACAATGGTCAATCTCCAAGAAACCAAACCTCCTTCATCAGATCACAGTATCAGACCAGCTTCTTCAAATCATACTACAAAGGTTGTAAATCCACACCAGAATCAGAAGTTAGTGGGCATGGTTAAACAGGAATATGACATGCCAACAGTTTTCAATCCCCCAAATGGGAACTTGTTCTTGGCACCATTTTATGGGATTCCTTCTCATGTATCAAAATCACAGGAGCAGTGTATGCTCAGAGGTACTCTCCATGGATTTGATCATCATGAACCTTATTATTATGATACTATTCTTCAAACGCAATCAATGCAGCAACAGTGA 915 0.4492 MNRGIEALSPASYLQNSNWLFQEGKGTIWTPEENKRFENALALYDKETPDRWMKVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLFPIPGYTNSSFTLEWVNGRGFDGFNQFYTSSGKRGTPTRPSEQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLQETKPPSSDHSIRPASSNHTTKVVNPHQNQKLVGMVKQEYDMPTVFNPPNGNLFLAPFYGIPSHVSKSQEQCMLRGTLHGFDHHEPYYYDTILQTQSMQQQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1976 304 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Acco07g1976 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Acco07g1976 304 Gene3D - 22 88 - -
Acco07g1976 304 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Acco07g1976 304 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Acco07g1976 304 Pfam Myb-like DNA-binding domain 29 73 IPR001005 -
Acco07g1976 304 FunFam Transcription factor SRM1 21 88 - -
Acco07g1976 304 SMART sant 25 77 IPR001005 -
Acco07g1976 304 SMART sant 132 182 IPR001005 -
Acco07g1976 304 CDD SANT 135 180 IPR001005 -
Acco07g1976 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Acco07g1976 304 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Acco07g1976 304 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 235 IPR043363 -
Acco07g1976 304 Gene3D - 134 184 - -
Acco07g1976 304 FunFam transcription factor MYB1R1 134 185 - -
Acco07g1976 304 CDD SANT 29 74 IPR001005 -
Acco07g1976 304 MobiDBLite consensus disorder prediction 115 136 - -
Acco07g1976 304 MobiDBLite consensus disorder prediction 205 225 - -
Acco07g1976 304 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1976 Acco-ChrAcco07 37266007 37267315 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g1976 Myb_DNA-binding 2.3e-12 CL0123