Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1967 ATGATTGTCTCTATGGACTTGAATGCCTCACCGGTGCCCGAGGAGGATGAGGATATTTTTGAGAGGCATATAGAACAGTATATCCAACCAGAAGAACGCATAGAAACTGCAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGGAAAAGGCGGTTGAAAAGAGAACGGGCAGATGATAGACCTGCCCATGTATCACAGTCAGCAACTAGTTATGATCAGACATTTAATGCAAAGTATCTTAAGTCATATGATAAAAGTAGGCTTCCACCAGGGTGGTTGGATTGCCCTTCATTTGGTCAGGAAATATATTGCATGATACCTTCCAAAGTTCCACTTGGCGAATCATTCAATGACTGTATTGCTCCTGGTCGAAGATACTCGTTTAAACAAGTGATACATCAACAAAGAGTTCTTGGGAGAAAACTTGGCTTGGTGATTGATCTGACGAATACTACTCGTTACTATCCAGTTTCAGATCTGAAGAAAGAGGGTATCAAGCATATTAAGATTCAATGCAAGGGGCGTGATTCTGTACCCGACAATTTGTCTGTGAATCAATTTGTCCACGAGGTTACTCAATTTCTATCACGTCAAAAACAAGCAAAGAAGTATATACTTGTCCATTGTACGCATGGACATAATCGCACTGGGTACATGATTGTTCATTATCTTATGCGCTCTATGCCTATGTCTGTCACCCAGGCAATAAAAATATTTTCTGAAGCACGCCCCCCGGGAATTTATAAACCTGATTATATTGATGCTTTGTACACTTTCTATCATGAAAAAAAGCCTGAAATGGTAGTTTGTCCTCCTACACCAGAGTGGAAGAGATCCTCTGAATTTGATCTTAATGGGGAAGCAATGCCTGATGATGATGGTGATGATGATGGATTGCCAGACCCTCCTCATGAGAACCATGAGACAGACGCAATAATGACTAATGATGATGTTTTGGGAGATGAAATACCTATTGATCAACAAGATGGATTTCGACATTTCTGTTATCAATCACTTAAATTGAATTATGGGGCTAGATCACATGCACATTTTCCAGGTTCACACCCAGTTTCTCTTAATAGGGAAAATTTACAATTACTACGACAGCGTTATTATTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGACGGGTGTTACTTGATTGATAGAAGTTTCAATTTTCGAAGGGTACAAATGAGGTTTCCCTGCAGAGGCTCAAATGATGGTTTGGCTGAGAAGACCCACCACTACACATTACTTGATGGGGAGATGATAATTGATACATTGCCTGATTCGCAGAAACAAGAGAGGAGATATCTCATATATGATATGATAGCAATTAACCATGTGTCAGTAATAGAGCGACCATTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGAAATCAGGAACGACATAATACATGCCAGAGCAGAAATCCTTATTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTGTCTACCGTTACAAAGCTTTTAAATGAATTCATTAAGAAACTCTCACATGATGCAGATGGCCTTGTATTTCAGGGTTGGGATGATCCTTATGTACCCCGCACTCATGAAGGCCTCCTGAAGTGGAAATATCCTGAGATGAATTCAGTAGATTTTCTCTTTGAGATTGATGACGATTGTCAGTCACTTTTCCTTCATGAACGAGGAAAAAAGAAACTCATGGAAGGGAATAGGGTTGCTTTCAGAGATGGTTCAGATCCCTTGCTTCATTCCGGGAAGATTATAGAGTGTTCTTGGGACTTAAATGAACAGGAATGGGTATACATGCGAACCAGGACAGATAAGTCAACTCCAAATGATATCAATACTTTTAAGAAGGTTATGCGGAGTATAAAAGACAACATCACACAGGATATCTTGTTGAATGAAATTTATGAGATAATTCGCCTTCCAATGTATGCTGACAGGATAAAAAATGACAGCAAAGCCCACCATCATATCGGCGCAGCACGCCGGAGGTGA 2052 0.4016 MIVSMDLNASPVPEEDEDIFERHIEQYIQPEERIETAVDIARREREERKRRLKRERADDRPAHVSQSATSYDQTFNAKYLKSYDKSRLPPGWLDCPSFGQEIYCMIPSKVPLGESFNDCIAPGRRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKEGIKHIKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKQAKKYILVHCTHGHNRTGYMIVHYLMRSMPMSVTQAIKIFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAMPDDDGDDDGLPDPPHENHETDAIMTNDDVLGDEIPIDQQDGFRHFCYQSLKLNYGARSHAHFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDTLPDSQKQERRYLIYDMIAINHVSVIERPFYERWKMLEKEVIEPRNQERHNTCQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLNEFIKKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEIDDDCQSLFLHERGKKKLMEGNRVAFRDGSDPLLHSGKIIECSWDLNEQEWVYMRTRTDKSTPNDINTFKKVMRSIKDNITQDILLNEIYEIIRLPMYADRIKNDSKAHHHIGAARRR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1967 683 PIRSF mRNA_capping_HCE 75 683 IPR017074 GO:0004484|GO:0006370|GO:0140818
Acco07g1967 683 Gene3D Protein tyrosine phosphatase superfamily 62 283 IPR029021 -
Acco07g1967 683 SMART dsp_5 122 262 IPR020422 GO:0006470|GO:0008138
Acco07g1967 683 CDD RNA_5'-triphosphatase 91 257 - -
Acco07g1967 683 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 554 - -
Acco07g1967 683 Gene3D DNA ligase/mRNA capping enzyme 314 553 - -
Acco07g1967 683 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 277 IPR029021 -
Acco07g1967 683 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311|GO:0016791
Acco07g1967 683 MobiDBLite consensus disorder prediction 47 69 - -
Acco07g1967 683 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 266 IPR020422 GO:0006470|GO:0008138
Acco07g1967 683 FunFam mRNA capping enzyme, putative 314 551 - -
Acco07g1967 683 CDD Adenylation_mRNA_capping 351 554 IPR001339 GO:0004484|GO:0005524|GO:0006370
Acco07g1967 683 Pfam mRNA capping enzyme, catalytic domain 355 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Acco07g1967 683 Gene3D - 554 645 IPR012340 -
Acco07g1967 683 Pfam Dual specificity phosphatase, catalytic domain 140 260 IPR000340 GO:0008138|GO:0016311
Acco07g1967 683 FunFam mRNA capping enzyme family protein 84 298 - -
Acco07g1967 683 SUPERFAMILY Nucleic acid-binding proteins 556 669 IPR012340 -
Acco07g1967 683 MobiDBLite consensus disorder prediction 47 62 - -
Acco07g1967 683 FunFam mRNA capping enzyme family protein 552 660 - -
Acco07g1967 683 Pfam mRNA capping enzyme, C-terminal domain 558 650 IPR013846 -
Acco07g1967 683 PANTHER MRNA-CAPPING ENZYME 83 665 - -
Acco07g1967 683 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
Acco07g1967 683 MobiDBLite consensus disorder prediction 283 309 - -
Acco07g1967 683 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1967 Acco-ChrAcco07 37161785 37173217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1967 1 683 Protein tyrosine phosphatase (PTP) family AT3G09100 69.913 0.0 961