Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1961 ATGCTTCAGATTCGGCTTAGTAAGGTTTCATCCTCTGAAGGTTTAGCAGGGGTGAAGCCCTCACCTGTTGAGACTGTTACAGTTACTTGTCCCGATCATCTAGTACTTGCTGATCTTCCTGTAGCAAAGGGCATAGGTTCAGCAACCGCTACTTCTCTGGTGAAGACTCTTGGTCGTAGATCTCGCCGCCAATGTGGTGACTGTGTCCACTTCTGTGTTCGTTGTGACTTCCCAATTGCAATCTATGGACGACTGAGCCCTTGTGACCATGCCTTCTGTCTTGATTGTGCTAGAAGTGATTCAATATGCTACCTGTGTGATGAACGAATCCAGAAAATTCAGACAATCAAAATGTTAGAAGGCATATTCATCTGTGCAGCTCCTCACTGCTTCAAGTCTTTCTTGAAGAAGTCAGAATTTGAAATGCATGTCCAAGATGTACATGCTAACCTTCTCCGTCCCAGTGTAGATAAAGAAGATGGAAATGAGTCAGAGACACCCAGTGTTCGACAATCTGCAATGTCAGATTCCTCCGCTCGAGCTCCCCAAAGGCCTGTTTTCTCTCCTGGTTCAAATTCCCAGCTACATGAACGAGAAGACAAGGCTCGTCAGCAACCGCCAAGAGACCAACCACCTTCAAGGCCGACTTTGCAGCCGAAGCCGCCTTCTTTCGGTCAAGTTCAAAACCACTCTGCAGATCCCCAGTCTGGCTCTAATGGAGCTATTCCGCAGGGCTTTTATCAACAAAATTCTGACATGCAGCGACCTCCACAAGATCCTTCCCAGTTTACAGATCGGCATCGAGGAGCCACACCGGAAACACCACTCCCTGATTATCCACCCATGCATTCCTCCCAGACACCCAATTTCCCAGTGCCAGTGAATGCTAACCCAATGTTGAATCCTCCTATGCCATTTGGTTATCCTCCATACCCGCCGCACGACGGAGCTCCGCCGTTTTATGTGAACCCCTATGATATGCGTTGGCAGGACTCAGCTTCTGAAGGAGGTGGAGACCAGAATTCCTTACTTGGTTTTCCACCGGTTGCTCCTAATGGCCCTAATTTTCCAGCAAATTATCCTCAGCCCATGAATGCAGGACCTGGTGGCCCTCCTTTTGAACTAGGACACGCTGGCATGGCTATGGATCCGCGAGACAGTAAAGGGATATTAGCACCACAGTCCATGACCCTCCCACCTCCACCGCCGTTGCCACCCATGTCTCATCTGAACAACAAGTATTATTCCGGTGAGTTTGGACACAATGGACATGGTTATGGTTGGCAGCATGATAATCGTGAAGCATTTGGTGGTCAGGACTAG 1323 0.4883 MLQIRLSKVSSSEGLAGVKPSPVETVTVTCPDHLVLADLPVAKGIGSATATSLVKTLGRRSRRQCGDCVHFCVRCDFPIAIYGRLSPCDHAFCLDCARSDSICYLCDERIQKIQTIKMLEGIFICAAPHCFKSFLKKSEFEMHVQDVHANLLRPSVDKEDGNESETPSVRQSAMSDSSARAPQRPVFSPGSNSQLHEREDKARQQPPRDQPPSRPTLQPKPPSFGQVQNHSADPQSGSNGAIPQGFYQQNSDMQRPPQDPSQFTDRHRGATPETPLPDYPPMHSSQTPNFPVPVNANPMLNPPMPFGYPPYPPHDGAPPFYVNPYDMRWQDSASEGGGDQNSLLGFPPVAPNGPNFPANYPQPMNAGPGGPPFELGHAGMAMDPRDSKGILAPQSMTLPPPPPLPPMSHLNNKYYSGEFGHNGHGYGWQHDNREAFGGQD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1961 440 MobiDBLite consensus disorder prediction 220 268 - -
Acco07g1961 440 FunFam E3 ubiquitin-protein ligase Hakai 69 123 - -
Acco07g1961 440 CDD RING-HC_HAKAI-like 70 119 IPR040380 -
Acco07g1961 440 MobiDBLite consensus disorder prediction 421 440 - -
Acco07g1961 440 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Acco07g1961 440 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 150 IPR013087 -
Acco07g1961 440 MobiDBLite consensus disorder prediction 166 193 - -
Acco07g1961 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 123 IPR013083 -
Acco07g1961 440 MobiDBLite consensus disorder prediction 153 296 - -
Acco07g1961 440 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Acco07g1961 440 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 430 IPR040383 GO:0016567|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1961 Acco-ChrAcco07 37117568 37120291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1961 1 437 C2H2 Transcription Factor Family AT5G01160 45.824 1.03e-109 326