Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1927 ATGTCGAGCATACAAATGTCCCATGTAGATTTAGAGCAAGGAGGAGGTTACCATCGTTCGGTGGTCGCGAGTGATGTCAGCGCCGACGGGAGTGTATGCTTCTCCGACGCCGACGATGGGTCCTGCTACTCTCACTTCTATTCAACCTACGGTGGTTCATACGACGATTGTAGTTTCGCTGGCGTTTCTGATTCTGAGGTTAGGTGTGTTGCTGATTCTAGGAGAGCTTCTTCAGCGACTGATTGTTCGGTGGAAGTTGAAATTGAAACCGGGGTTCCTGAAATTAAGGTGCATTTGGCCAAAGTAGAGAGAGATTGTAGGATTTGTCACTTGGCTTTGGAGAGTGATAGCAATGATGAGTCTGGGGTTCCCATTGAATTGGGATGCTCTTGTAAGGATGATCTAGCTGCTGCTCACAAACACTGTGCTGAGGCCTGGTTCAAGATCAAAGGGAATAGGACCTGTGAAATTTGCCATTCGGTAGCCCGGAATGTTTATGGAGGGAACGAGGAGGGAACAGAACATTCAAGCGATAGCAATAATGCTCCTACGGCAGCTGCAACAACAGTGTCCACAGCAGCACCTTCTGCAGAAACTCGAAGATTCTGGCATGGCCATAGGTTCCTGAATTTTCTGCTTGCTTGTATGGTTTTTGCTTTTGTCATATCATGGCTTTTTCACTTTAATGTACCTTCTACTTAA 702 0.4672 MSSIQMSHVDLEQGGGYHRSVVASDVSADGSVCFSDADDGSCYSHFYSTYGGSYDDCSFAGVSDSEVRCVADSRRASSATDCSVEVEIETGVPEIKVHLAKVERDCRICHLALESDSNDESGVPIELGCSCKDDLAAAHKHCAEAWFKIKGNRTCEICHSVARNVYGGNEEGTEHSSDSNNAPTAAATTVSTAAPSAETRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPST 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1927 233 ProSiteProfiles Zinc finger RING-CH-type profile. 98 165 IPR011016 GO:0008270
Acco07g1927 233 MobiDBLite consensus disorder prediction 170 189 - -
Acco07g1927 233 PANTHER ZINC FINGER, RING-CH-TYPE 23 232 - -
Acco07g1927 233 Pfam RING-variant domain 106 158 IPR011016 GO:0008270
Acco07g1927 233 SMART ringv_2 105 159 IPR011016 GO:0008270
Acco07g1927 233 MobiDBLite consensus disorder prediction 169 189 - -
Acco07g1927 233 SUPERFAMILY RING/U-box 103 162 - -
Acco07g1927 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 167 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1927 Acco-ChrAcco07 36741314 36744146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1927 60 233 C3H Transcription Factor Family AT5G05830 61.714 2.73e-72 217